Pairwise Alignments

Query, 675 a.a., TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 from Pseudomonas fluorescens FW300-N2E2

Subject, 488 a.a., TRAP transporter, DctM subunit from Dechlorosoma suillum PS

 Score = 73.2 bits (178), Expect = 3e-17
 Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 20/266 (7%)

Query: 129 PIICGLFLAYGLFGEYLPGDLAHRGYGLDQIINQLSFG--------TEGLYGTPTYVSAT 180
           P++ G  + + LFG  +   LA  G     I  +L            E ++G     +  
Sbjct: 10  PVMFGALVLFLLFGYPVAFALAANGMVFGFIGMELGLLHPALFQALPERVFGIMANDTLL 69

Query: 181 YIFLFILFGAFLEKAGMIKLFTDFAMGLFGHKLGGPAKVAVVSSALMGTITGSGIANVVT 240
            I  F   G  LE++GM +   D    LFG   GG A   +   AL+   TG   A+V++
Sbjct: 70  AIPFFTFMGLVLERSGMAEDLLDTIGQLFGPMRGGLAYAVIFVGALLAATTGVVAASVIS 129

Query: 241 TGQFTIPLMKRFGYKAAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAAL 300
            G  ++P+M R+GY    A GV A S   +QI+PP +  V  IMA+ +     ++ + A+
Sbjct: 130 MGLISLPIMLRYGYDKRLASGVIAASGTLAQIIPPSL--VLIIMADQLGKSVGDMYEGAM 187

Query: 301 IP----ACLYFGSVFWMVHLEAKRSDLKGLPKDQCPSAWGAVKDSWFLLIPLGVLVYL-- 354
           +P      LY G V  +  ++   +    L       A   ++    L+ PL VL++L  
Sbjct: 188 VPGLILTSLYVGYVVILTLIKPNAAPALPLEARSLRGAKLLMRVLTSLVPPL-VLIFLVL 246

Query: 355 --LFSG-RTPLFSGMVGLALTAIVIL 377
             +F G  TP   G +G +   I+ L
Sbjct: 247 GTIFMGIATPTEGGAMGASGALILAL 272