Pairwise Alignments

Query, 382 a.a., Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 364 a.a., radical SAM enzyme, Cfr family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  252 bits (643), Expect = 1e-71
 Identities = 146/355 (41%), Positives = 205/355 (57%), Gaps = 11/355 (3%)

Query: 8   TNLLGLTQPEMEKFFDS-IGEKRFRAGQVMKWIHHFGVDDFDAMTNVGKALREKLKAVAE 66
           T++L LT  E+E F  + +GE RFRA QV +W+       FD MTNV KA R +L   A 
Sbjct: 2   TDILNLTYEELEAFMTAELGEPRFRARQVWQWLWQKCARSFDEMTNVSKATRARLAEKAV 61

Query: 67  IRGPEVVSQDISSDGTRKWVVRVASGSCVETVYIPQGKR-GTL----CVSSQAGCALDCS 121
           I  PEV +   S+DGT K+++R+A G+ VETV IP   R GTL    C+S Q GCA+ C+
Sbjct: 62  ITWPEVETVQKSADGTTKFLLRLADGALVETVLIPSASREGTLRITQCLSCQVGCAMGCT 121

Query: 122 FCSTGKQGFNSNLTAAEVIGQVWIANKSFGSVPATVDRAI-TNVVMMGMGEPLLNFDNVV 180
           FCSTG  GF  N+T  E++GQV +A    G   +  D  I  N+V MGMGEPLLN + V+
Sbjct: 122 FCSTGTMGFERNMTMGEILGQVLVARAHLGD--SRPDHPILRNLVFMGMGEPLLNLNEVM 179

Query: 181 SAMHLMMDDLGYGISKRRVTLSTSGVVPMIDELAKHIDVSLALSLHAPNDALRNQLVPIN 240
            ++  + D+ G   S RR+T+ST G+   + EL +     LA+SLHAPN  +R +++P  
Sbjct: 180 RSLRTLNDEFGLSFSPRRITVSTCGIEKGLRELGESGLAFLAVSLHAPNQEIRKRIMPKA 239

Query: 241 KKYPLKMLLESCQRYMSSLGEKRVLTIEYTLLKDVNDKVEHAVEMIELLKNIPCKINLIP 300
             + L  L+ + + Y     E+  +T EY LL  VND +EHA E++ L+     K+NLI 
Sbjct: 240 AHWHLDDLITALESYPLKTRER--VTFEYLLLGGVNDGIEHARELVRLVSRTKGKLNLIV 297

Query: 301 FNPFPHSGYERPSNNAIRRFQDQLHHAGFNVTVRTTRGEDIDAACGQLVGQVLDR 355
           +NP     Y+ P+   I  F+  L        +R ++G+DI AACGQL    L R
Sbjct: 298 YNPAEGDPYDAPTPERILAFEQYLWSKNITAIIRKSKGQDIKAACGQLKASELQR 352