Pairwise Alignments

Query, 270 a.a., Glutamate synthase [NADPH] small chain (EC 1.4.1.13) from Pseudomonas fluorescens FW300-N2E2

Subject, 262 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  130 bits (326), Expect = 4e-35
 Identities = 79/261 (30%), Positives = 140/261 (53%), Gaps = 1/261 (0%)

Query: 8   LLATLAAACLYAAATLYQGTRLATGAKANKRLLVTLGVLAVLGHAASLYTHLMTPIGLGL 67
           ++ + +A   Y  A +   +RL      N++ +  +  +AV+ HAA+L   + T  G   
Sbjct: 2   VIFSASAMFFYCIALVLVTSRLFHPQGPNRKAVAGIAAIAVVLHAAALSQAIFTTDGQNF 61

Query: 68  DFFNAASLIAVAVIGLTLIACSRIPVENLLVLLFPLGLATVLLAQFAPSGTVQIIDEEPG 127
              N  SL+   +     +   R+ V  ++ +++   + +V L    P   +   +  P 
Sbjct: 62  SLTNVISLVNWIIAFTFTVMMFRLKVIVVVPVVYACSVLSVALLWLLPPKFIIHFELYPE 121

Query: 128 ILAHILLSILAYGLFTIAVFQALLLLVQDHQLKNKHPSGLIRNFPPLQTMESLLFGFLWA 187
           +LAH++LS++AY    IA   A+ L +  ++LK K    L  + PPL T+E  L+  +  
Sbjct: 122 VLAHVVLSLMAYSALMIAALYAIQLAMIQNKLKKKQLM-LSPSIPPLMTVEKQLYHLVII 180

Query: 188 GWSLLSLSLISGWLFVENLFAQHLVHKTLLACLAWIVFSVLLWGRNRLGWRGHKAIRWTL 247
           G  LLSLSL +G++F++++FA    HK +L+ +AW V+  +LW +  +G +   A+ +TL
Sbjct: 181 GVILLSLSLATGFIFLDDMFADGKGHKAILSIIAWFVYIAMLWQQYWVGCKIRTAVIYTL 240

Query: 248 AGFCLLMLAYFGSKLVREYIL 268
            G  LL LAYFG+++V+E IL
Sbjct: 241 TGATLLSLAYFGARIVKELIL 261