Pairwise Alignments

Query, 456 a.a., virulence sensor protein from Pseudomonas fluorescens FW300-N2E2

Subject, 1139 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 54.7 bits (130), Expect = 2e-11
 Identities = 51/197 (25%), Positives = 82/197 (41%), Gaps = 23/197 (11%)

Query: 269 RSKWMAGSTPAPAPSIWERFSRWGYWCVTVVVVFGLLSLLWNRRLQIQIDQRLKAEAVLK 328
           RS    GS     PS +   ++  +W + + +V   L+L+    L + I  + + E  +K
Sbjct: 330 RSMLPPGSVVINEPSRFYELNKQVFWTIIISLVILSLTLVL---LVMNILDKRRVEGKIK 386

Query: 329 DQLMLQRALMDAIPDPIFIRDLEGRLVMCNKSY-------EDQLATRFEKLRGTRLTDSA 381
           DQL   R L D IP P++ +D +GR+  CN ++        + +  R+E   G RL    
Sbjct: 387 DQLSYLRQLTDTIPLPVYSKDADGRIRECNLAFLQFFSVERESVLGRYEWQAGERLA--- 443

Query: 382 AFPPATAELLHGEVMEQL--RTGQSRFFDRQLMFSSGLREIYHWSVPFYGADGQLRGILG 439
                   LL   V   L    GQ+ + D         R +      +  A G + G++G
Sbjct: 444 --------LLRNAVDTDLMREPGQAAYDDTLPGPDGEARNVIVHKATYSNARGAIAGLVG 495

Query: 440 GWTDAGRRRRRCDKLMA 456
              D   R+R  D L A
Sbjct: 496 VVVDYTDRKRAEDSLRA 512