Pairwise Alignments

Query, 260 a.a., Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 275 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  148 bits (373), Expect = 1e-40
 Identities = 86/252 (34%), Positives = 145/252 (57%), Gaps = 11/252 (4%)

Query: 6   WGGLVFLHFPILIIFLYAFNTEDAAFSFPPKGLTLKWFSVAFSRPDVLEAIKLSLQVAAI 65
           WGG+ FL+ P+ I+  Y+FN       +   G + KW+   F    +L+A+  SL+VA  
Sbjct: 16  WGGMFFLYAPMFILVFYSFNESKLVTVWG--GFSAKWYGELFRDDQILDAVATSLKVAFF 73

Query: 66  ATLIAMVLGTLASAALYR-RDFFGKQGISLMLILPIALPGIITGIALLATFKTLG----- 119
           A+ +A++LGT+A+  + R    +GK  +S M+  P+ +P +ITG++LL  F  +      
Sbjct: 74  ASTMAVILGTMAAFVMTRFARSWGKMTLSNMITAPLVMPEVITGLSLLLLFVHMADLLGW 133

Query: 120 -IEPGMFTIVVGHATFCVVIVYNNVIARLRRTSHSLIEASMDLGADGWQTFRYIILPNLG 178
             E GM T+ + H+TFC   V   V +RLR    S+ EA+ DLGA   +TF +I +P + 
Sbjct: 134 PAERGMLTVWIAHSTFCAAYVAVVVSSRLRELDMSIEEAAQDLGATPLKTFFHITVPMIS 193

Query: 179 SALLAGGMLAFALSFDEIIVTTFTAG-HERTLPLWLLNQLSRPRDVPVTNVVAMLVMIVT 237
            AL+AG +L+F+LS D++++ +F +G    TLP+ + + + R    P  N +A L++++ 
Sbjct: 194 PALIAGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSV-RMGVSPKINALATLIILIV 252

Query: 238 MLPILGAYYLTR 249
            L    ++YL R
Sbjct: 253 SLIAFISWYLAR 264