Pairwise Alignments

Query, 304 a.a., Transcriptional regulators, LysR family from Pseudomonas fluorescens FW300-N2E2

Subject, 296 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  115 bits (287), Expect = 2e-30
 Identities = 82/295 (27%), Positives = 143/295 (48%), Gaps = 7/295 (2%)

Query: 4   LRQIRHFIAVAETGSISAAAQTAFISQSTLTLAIQQLEQEIGVSLFNRHAKGMTLTHQGH 63
           ++ + +F+ + ETG+ + AA+ +FI+Q TL+  IQ+LE+ +G  L +R+ + + LT  G 
Sbjct: 5   IKTLHYFLTLVETGNFTRAAEKSFITQPTLSKIIQRLEENLGQQLLHRNNQKIELTQAGI 64

Query: 64  QFLRQAHLILATVDNAKRSLQQSTDQVAGQVTIGVTSLVAGYYLADLLTRFQRAYPNVEI 123
                A  IL      +  L   +   +G + +GV  +++   + DLLT F++ YP +E+
Sbjct: 65  LLENSAREILGQWHRLQEDLTNLSGLKSGHLRLGVCPMMSS-LIIDLLTAFRQQYPGIEL 123

Query: 124 RVMEDERPYIEHLLVSGEIDVGVLILSNLEDRHALQTEVLTHSPHRLWLPAQHPLLEHDS 183
           ++ E      E  L++  +D+    L    D   L    LT  P    LP  H L + ++
Sbjct: 124 QMYEYGGFGCEQALLNNSLDIAFTALPTTHDIE-LANRALTRYPLLACLPKDHALAQQEA 182

Query: 184 INLADVAREPLIQLNVD-EMDRNAQRLWRGAGLQPKITLRTASTEAVRSLVAAGLGVSIQ 242
           +   D    P I  N D  + +   RL   AG+Q  I  R+   + + ++V A +GV+I 
Sbjct: 183 VTWQDFEAYPFILYNEDFSLAKLITRLSHKAGVQLNIAFRSGQWDFLATMVEAQMGVAIL 242

Query: 243 PDMTYRPWSLEGDIIEARPIADLNQTLDVGLAWRRGTARPASVDPFLAVAREQPH 297
           P+       L+G  +  +PI   N T D+ L WR+      +    L ++ EQ H
Sbjct: 243 PEPICH--KLQGSELVFKPIRP-NLTWDLALIWRKDLPLTPAAQALLDLS-EQAH 293