Pairwise Alignments

Query, 178 a.a., Chemotaxis signal transduction protein from Pseudomonas fluorescens FW300-N2E2

Subject, 164 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.4 bits (137), Expect = 1e-13
 Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 12/159 (7%)

Query: 5   ETRRGAAPTARQS----LFLVFCIGNERYALQAIDVVEVLPRLPLKPIARAPSWVAGVFA 60
           +TR  AA  A +      ++ F + NE Y +  + V EVL    + P+  AP +V G+  
Sbjct: 3   DTRNVAAVAASKDDAVLQWVTFKLDNETYGINVMQVQEVLRYTEIAPVPGAPHYVLGIIN 62

Query: 61  WRGTVVPVIDLCALTFGQSAEARTSTRLVLVRYQGDAQQTGQVLGLILEQATDTV--RCD 118
            RG VV VID  +    QSAE   STR+V++      +   QV+G++++   + V  R  
Sbjct: 63  LRGNVVTVIDTRSRFGLQSAEVDDSTRIVII------EAEKQVIGILVDSVAEVVYLRRS 116

Query: 119 PADFKPYGLDNRQAPYLGPVREDAQGLLQWVRVNDLLDE 157
             D  P       A ++  V      LL  V ++ LL +
Sbjct: 117 EIDNAPNVGTEESAKFIQGVSNRDNELLILVDLDKLLSD 155