Pairwise Alignments

Query, 211 a.a., Transcriptional regulator, TetR family from Pseudomonas fluorescens FW300-N2E2

Subject, 203 a.a., TetR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  104 bits (259), Expect = 1e-27
 Identities = 65/193 (33%), Positives = 101/193 (52%), Gaps = 3/193 (1%)

Query: 19  KRQAILDAAKRLFVSMGYASTSMDAVATEAGVSKLTVYSHFNDKETLFSAAVIAKC-EEQ 77
           K+  IL AA  LF   G+ +TSMD VA  AGVSK TVYSHF  K+ LF A++ +KC   Q
Sbjct: 12  KKAQILHAAIELFCGQGFPNTSMDEVAKLAGVSKQTVYSHFGSKDDLFVASIESKCVVHQ 71

Query: 78  VPPLFFEWPDGVPIEHVLLNIARGFHLLVSSEESLNLHRLIMALGSQDPKLSTIFYEAGP 137
           V    F  P     E  LL+    F  ++ S E++ + +  +A     P++S +F+ AGP
Sbjct: 72  VTAELFTSPQDP--EQALLHFGNYFGEMIVSPEAIEVFKTCVAQADTHPEISALFFNAGP 129

Query: 138 QRMLSGMERLLIKVNQSGALNIDKPRNAAEHFFCLIKGAANFRLLSGCGPAPEPEAAEAH 197
           + +L+ +E    +V + G  +    R+A+     ++ G    +L  G           A+
Sbjct: 130 EFLLNLLENYFEQVEKLGEYHFGDLRHASVRLCMMLFGEMRLKLELGLPVEDLIAKRPAY 189

Query: 198 VQEVVGLFMRAYR 210
           ++E V +F+RAYR
Sbjct: 190 IKETVSMFLRAYR 202