Pairwise Alignments

Query, 383 a.a., N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) from Pseudomonas fluorescens FW300-N2E2

Subject, 374 a.a., acetylornithine deacetylase from Sinorhizobium meliloti 1021

 Score = 98.6 bits (244), Expect = 3e-25
 Identities = 103/330 (31%), Positives = 148/330 (44%), Gaps = 33/330 (10%)

Query: 52  DVDNFWASHGKHDGPVLCFAGHTDVVPTGPVQAWQLDPFDAVIDEHGMLCGRGAADMKGS 111
           D  N +A+ G  +      +GH DVVP      W  DPF   + E   L GRG  DMKG 
Sbjct: 48  DRSNIFATIGPKEARGYIISGHMDVVPAAET-GWTSDPFRLRV-EADRLYGRGTTDMKGF 105

Query: 112 LAAMIVAAERFVADYPDHKGSLTFLITSDEEGPAHHGTKAVIERLKARQERLDWCIVGEP 171
           LAA++ A  +  A     +  L   ++ DEE     G   +I RL     +    I+GEP
Sbjct: 106 LAAVLAAVPKLAA--MPLRRPLHLALSYDEEAGCR-GVPHMIARLPELCRQPLGAIIGEP 162

Query: 172 SSTTLVGDVVKNGRRGSLGAKLTVRGKQGHVAYPHLAKNPIHLAAPALAELAAE------ 225
           +    +        +G   A+LTVRG+ GH + P    N IH  A  L +  AE      
Sbjct: 163 TGMRAI-----RAHKGKAAARLTVRGRSGHSSRPDQGLNAIHGVAGVLTQAVAEADRLVG 217

Query: 226 -HWDHGNDFFPP-TSFQISNLNAGTGATNVIPGDLVAVFNFR-FSTESTVEGLQ--QRVA 280
             ++H   F PP +S QI  +  G  A N+IP      F  R  S     E L   ++ A
Sbjct: 218 GPFEH--VFEPPYSSLQIGTVKGGQ-AVNIIPDSCEVEFEARAISGVDPAELLAPVRKTA 274

Query: 281 DILDKHQLDWHIDW-ALSGLPFLT-EPGALLDAVSSSIKDVTGRETQASTSGGTSDGRFI 338
           + L    L + ++W  LS  P L+ EP A L A+   ++++TGRE   + S GT  G F 
Sbjct: 275 EALT--TLGFEVEWQELSAYPALSLEPDAPLAAL---LEELTGREALPAVSYGTEAGLF- 328

Query: 339 ATMGTQVVELGPVN-ATIHQVNERVLAADL 367
              G   +  GP +    H+ +E +L  +L
Sbjct: 329 QRAGIDAIICGPGDIGRAHKPDEYILIDEL 358