Pairwise Alignments

Query, 859 a.a., DNA mismatch repair protein MutS from Pseudomonas fluorescens FW300-N2E2

Subject, 857 a.a., DNA mismatch repair protein MutS from Pseudomonas sp. BP01

 Score = 1504 bits (3895), Expect = 0.0
 Identities = 756/854 (88%), Positives = 802/854 (93%), Gaps = 2/854 (0%)

Query: 5   VNDLSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAG 64
           ++DLS+HTPMMQQYW+LKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAG
Sbjct: 1   MSDLSAHTPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAG 60

Query: 65  MAIPMCGIPYHAAEGYLAKLVKLGESVVICEQVGDPATSKGPVERQVVRIITPGTVSDEA 124
            +IPMCGIP+H+ EGYLAKLVKLGESVVICEQ+GDPATSKGPVERQVVRIITPGTVSDEA
Sbjct: 61  QSIPMCGIPFHSLEGYLAKLVKLGESVVICEQIGDPATSKGPVERQVVRIITPGTVSDEA 120

Query: 125 LLDERRDNLIAAVLGDERLFGLAVLDITSGNFSVLEIKGWENLLAELERVNPVELLIPDD 184
           LLDERRDNLIAA+LGDERLFGLAVLDITSGNFSV EIKGWENLLAELER+NPVELLIPDD
Sbjct: 121 LLDERRDNLIAALLGDERLFGLAVLDITSGNFSVQEIKGWENLLAELERLNPVELLIPDD 180

Query: 185 WPKDLPAEKRRGVRRRAPWDFERDSALKSLCQQFSTQDLKGFGCENLTLAIGAAGCLLAY 244
           WP+DLPAEKR G RRRAPWDF+RDSA K+LCQQF+T+DLKGFGC+ LTLAIGAAGCLL Y
Sbjct: 181 WPRDLPAEKRPGARRRAPWDFDRDSARKALCQQFATKDLKGFGCDKLTLAIGAAGCLLTY 240

Query: 245 AKETQRTALPHLRSLRHERLDDTVVLDGASRRNLELDTNLAGGRDNTLQSVVDRCQTAMG 304
           AKETQRTALPHLRSLRHERLDDTV+LDGASRRNLELD NLAGGRDNTLQSVVDRCQTAM 
Sbjct: 241 AKETQRTALPHLRSLRHERLDDTVILDGASRRNLELDVNLAGGRDNTLQSVVDRCQTAMA 300

Query: 305 SRLLTRWLNRPLRDLTVLLARQSSITCLLDRYRFEQLQPQLKEIGDIERILARIGLRNAR 364
           SRLL+RWLNRPLRDL VL ARQ SI CLLD YRFE+LQPQLKEIGDIERILARIGLRNAR
Sbjct: 301 SRLLSRWLNRPLRDLKVLQARQDSIRCLLDSYRFEKLQPQLKEIGDIERILARIGLRNAR 360

Query: 365 PRDLARLRDALGALPELQVAMTGLEAPHLQQLARTTSTYPELAALLEKAIIDNPPAVIRD 424
           PRDLARLRDALGALPELQ AMT LEAPHL +LA  T TYPELA+LLE+AIIDNPPAVIRD
Sbjct: 361 PRDLARLRDALGALPELQNAMTELEAPHLARLAAITGTYPELASLLERAIIDNPPAVIRD 420

Query: 425 GGVLKTGYDAELDELQALSENAGQFLIDLEAREKARTGLANLKVGYNRIHGYFIELPSKQ 484
           GGVLKTGYD ELDEL A+SENAGQFLIDLEAREKARTGLANLKVGYNR+HGYFIELP+KQ
Sbjct: 421 GGVLKTGYDNELDELLAISENAGQFLIDLEAREKARTGLANLKVGYNRVHGYFIELPTKQ 480

Query: 485 AEQAPADYVRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYEALLEDLISQLPP 544
           AEQAP DY+RRQTLKGAERFITPELK FEDKALSAKSRALAREKMLY+ALLE LIS L P
Sbjct: 481 AEQAPGDYIRRQTLKGAERFITPELKVFEDKALSAKSRALAREKMLYDALLETLISHLAP 540

Query: 545 LQDTAGALAELDVLSNLAERALNLDLNCPRFVSEPCMRISQGRHPVVEQVLTTPFVANDL 604
           LQD+A ALAELDVLSNLAERAL LDLNCPRF+ EPC+RI QGRHPVVEQVLTTPFVANDL
Sbjct: 541 LQDSAAALAELDVLSNLAERALTLDLNCPRFIDEPCLRIEQGRHPVVEQVLTTPFVANDL 600

Query: 605 SLDDNTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSD 664
            LD++TRML+ITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSD
Sbjct: 601 GLDNSTRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSD 660

Query: 665 DLAGGRSTFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAHLRAY 724
           DLAGGRSTFMVEMSETANILHNAT+RSLVLMDEVGRGTSTFDGLSLAWAAAERLA LRAY
Sbjct: 661 DLAGGRSTFMVEMSETANILHNATDRSLVLMDEVGRGTSTFDGLSLAWAAAERLAQLRAY 720

Query: 725 TLFATHYFELTVLPESQPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVP 784
           TLFATHYFELTVLPES+PLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVP
Sbjct: 721 TLFATHYFELTVLPESEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVP 780

Query: 785 SEVITRAREHLSRLETTSLPHEAPRPTKGK--PTAPQQSDLFASLPHPVLDELAKLDLDD 842
             VI RAREHL+RLETTSLPHE     K +  P  P QSDLFASLPHP +++L KL LD+
Sbjct: 781 GVVIQRAREHLARLETTSLPHEQAPTEKARDVPQVPHQSDLFASLPHPAIEKLGKLQLDE 840

Query: 843 LTPRRALDLLYTLK 856
           +TPR+A+++LY LK
Sbjct: 841 MTPRQAIEMLYQLK 854