Pairwise Alignments

Query, 217 a.a., Transcriptional regulator, LuxR family from Pseudomonas fluorescens FW300-N2E2

Subject, 222 a.a., two component LuxR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  182 bits (462), Expect = 4e-51
 Identities = 101/206 (49%), Positives = 138/206 (66%), Gaps = 3/206 (1%)

Query: 5   EILIADDHPLFRSALHQAVTLGLGPAVRLTEVASIAELEVQLTAKADWDLVLLDLNMPGA 64
           +I+IADDHPLFR AL   +T      + L E  ++  L+  LT   D DL+LLDLN+P A
Sbjct: 6   KIIIADDHPLFRQALVNTLTTQFDQPM-LFEAETVTALDEILTQHQDADLLLLDLNIPNA 64

Query: 65  YGFSGLVLLRGQYPQIPVVMVSAQEEASVMVKAREFGASGFIPKSSSLEMIQKAVKAVLD 124
           +GF+ LV +R  YP I +V++S QE+   + KA  FGA+GFIPKSS +E + KA+ AV+ 
Sbjct: 65  HGFNTLVNIRNSYPHIGIVVISGQEDKVTVGKAMSFGAAGFIPKSSPVEQMVKAINAVMA 124

Query: 125 GDVCWPPQAFEAVSVSEEAKAASEGLASLTPQQFRVLTMVCEGLLNKQIAYELNVSEATI 184
           G    PP   +  +V+ +  + S  +ASL+P+Q ++L M  +GLLNKQIAYEL +SEATI
Sbjct: 125 GRQWTPPGCEDLSAVTLD--SMSSKIASLSPRQHKILMMFADGLLNKQIAYELGLSEATI 182

Query: 185 KAHVTAIFRKLNVRTRTQAALLLQQL 210
           KAH +AIF KL V TRTQA + + QL
Sbjct: 183 KAHASAIFLKLGVHTRTQAVIAMSQL 208