Pairwise Alignments

Query, 217 a.a., Transcriptional regulator, LuxR family from Pseudomonas fluorescens FW300-N2E2

Subject, 206 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  140 bits (354), Expect = 1e-38
 Identities = 83/210 (39%), Positives = 131/210 (62%), Gaps = 7/210 (3%)

Query: 1   MATYEILIADDHPLFRSALHQAVTLGLGPAVRLTEVASIAELEVQLTAKADW-DLVLLDL 59
           + T+ ++IADDHPL+  AL   +   L P  ++++  +  EL   L  + +  DL+++DL
Sbjct: 2   LPTFHVMIADDHPLYLDALVNGLVSHL-PGTQVSQANNYIELFDSLYLQVEEIDLLIMDL 60

Query: 60  NMPGAYGFSGLVLLRGQYPQIPVVMVSAQEEASVMVKAREFGASGFIPKSSSLEMIQKAV 119
            MPG+ G++GL  LR Q+P +P+V++SA ++     +  + GA+ FI KS++   I K V
Sbjct: 61  FMPGSSGYAGLSFLRTQFPTLPIVVISALDDLIARSQCIQHGAA-FISKSTAPTNIFKQV 119

Query: 120 KAVLDGDVCWPPQAFEAVSVSEEAKAASEGLASLTPQQFRVLTMVCEGLLNKQIAYELNV 179
           + +LDG   +P    ++   +  AK     + +LTP QFRVL ++  G  NK IA  LN+
Sbjct: 120 EQILDGSYQFPLTQIKSSIETINAKK----IKTLTPSQFRVLHLIAAGHSNKTIADSLNI 175

Query: 180 SEATIKAHVTAIFRKLNVRTRTQAALLLQQ 209
           SE T+KAH++AIF KL+V+ RTQAALLL +
Sbjct: 176 SEKTVKAHISAIFEKLDVKNRTQAALLLSE 205