Pairwise Alignments

Query, 217 a.a., Transcriptional regulator, LuxR family from Pseudomonas fluorescens FW300-N2E2

Subject, 220 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  196 bits (498), Expect = 3e-55
 Identities = 106/208 (50%), Positives = 147/208 (70%), Gaps = 4/208 (1%)

Query: 6   ILIADDHPLFRSALHQAVTLGLGPAVRLTEVASIAELEVQLTAKADWDLVLLDLNMPGAY 65
           I+IADDHPLFR+AL QA++            ++ A   V  +    +DLVLLDL MPG++
Sbjct: 8   IIIADDHPLFRNALRQALSSAFEHTQWFEADSADALQSVLDSPTVSYDLVLLDLQMPGSH 67

Query: 66  GFSGLVLLRGQYPQIPVVMVSAQEEASVMVKAREFGASGFIPKSSSLEMIQKAVKAVLDG 125
           G+S L+ LR  YP +PV+++SA E+ + + +A  +G SGFIPKS+S+E +++A+ AVL G
Sbjct: 68  GYSTLIHLRSHYPDLPVIVISAHEDINTISRAIHYGGSGFIPKSASMETLKEALTAVLYG 127

Query: 126 DVCWPPQAFEAVSVSEEA--KAASEGLASLTPQQFRVLTMVCEGLLNKQIAYELNVSEAT 183
           D+ W P+  + + + +++  K AS+ L+ LTPQQ++VL M  EGLLNKQIAY+L VSEAT
Sbjct: 128 DI-WLPKGADIIPIEDDSTDKMASK-LSDLTPQQYKVLQMFAEGLLNKQIAYDLGVSEAT 185

Query: 184 IKAHVTAIFRKLNVRTRTQAALLLQQLE 211
           IKAH TAIFRKL VR RTQA + L QLE
Sbjct: 186 IKAHATAIFRKLGVRNRTQAVIALGQLE 213