Pairwise Alignments

Query, 328 a.a., LysR family transcriptional regulator PA3398 from Pseudomonas fluorescens FW300-N2E2

Subject, 300 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  186 bits (472), Expect = 6e-52
 Identities = 103/288 (35%), Positives = 167/288 (57%), Gaps = 4/288 (1%)

Query: 24  TLRQLQVFVAVAQQESVSRAAGQLNLSQSAASTSITELERQSSCQLFDRAGKRLSLNALG 83
           +L+QL+VF  + Q ++++ AA  L LS++A S +++ELE+Q    LFDR   RL LN  G
Sbjct: 6   SLKQLKVFSTLTQHKTLTAAADGLFLSKAAVSMALSELEKQLGHNLFDRVNNRLILNQEG 65

Query: 84  KQLLPQAVALLDQAKEIEDLLNGKSGF-GSLAVGATLTIGNYLATLLIGGFMQRHPESQV 142
            +L P A  LL +A +IE L N +    G L +GA+ T+GN +A  L+  F +RH + ++
Sbjct: 66  HKLQPLADELLHRAGDIEQLFNDEQSLSGLLRIGASDTLGNQVAPYLLSDF-RRHTQHEL 124

Query: 143 K-LHVQNTANIVHQVAHYEIDLGLIEGDCSHPDIEVQSWVEDELVVFCAPQHPLAKRGQA 201
           + L + N+  I   +  YE+D+ LIEG   HP+++   +  DE+ V C P HPL      
Sbjct: 125 QSLFISNSTQICDMLIAYELDIALIEGKIQHPELDATPFSSDEMCVICPPDHPLPADSDI 184

Query: 202 TMEELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESGLGIGCIS 261
            +  L    WILRE GSG+R  F + +       +   +L +TEA+  +V +GLG+ C+S
Sbjct: 185 PLHHLEASHWILREAGSGSREFFLRVVAPRLEQWHEAFQLNNTEALINSVSAGLGLACLS 244

Query: 262 RLALRDAFRRGSLVAVETPDMDLARQFYFIWHKQKYQTSAMREFLELC 309
           RL+   A R G +  +  P +++ R+F+ + HK+KY +  ++ F+  C
Sbjct: 245 RLSAEPAIRDGRVKVLSLP-LNMKRRFWLLVHKEKYLSPLLKTFIAFC 291