Pairwise Alignments

Query, 318 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  187 bits (475), Expect = 3e-52
 Identities = 102/283 (36%), Positives = 159/283 (56%)

Query: 20  DLAAFAVLMEAGSFTLAAQQLGCSKGQLSKRISLLEKRFSVVLLQRTTRRLSLTAAGAAL 79
           ++  F  ++E GSF+ AA++LG +K  +SKRIS LE+   V L+QRTTRRL LT AG   
Sbjct: 6   NIPLFVSVVELGSFSEAARRLGINKSAVSKRISALEQALGVKLIQRTTRRLHLTDAGRQY 65

Query: 80  LPQAQALLVQVERARQALARLKDDISGPVRMTVPVSLGETFFEGLLMEFARTYPNVQIEL 139
                     +++A+ ALA  +  + G +++++P   G+     LL EF+R YP + +E+
Sbjct: 66  YEYVHQAAALMQQAQDALASQQGAVQGSLKVSLPNVFGQRHIAPLLSEFSRQYPTINLEV 125

Query: 140 ELNNGYRDLSRDGFDLAIRSDAAIDERLVARPLLAWHEMTCASPAYLEHYGEPETPQALA 199
            L++   DL ++G D+ +R     D  LVA  L   H + CASP YL H   P +   L 
Sbjct: 126 SLDDRVVDLLKEGLDMVVRIGDLPDSSLVAVKLAPCHSLLCASPDYLAHQSHPRSLADLR 185

Query: 200 EHRCLLNSHYSGREEWLYHQQHELLRVRVSGPFASNHYSLLKKAALAGAGIARLPSYLLH 259
            H CL  S++ G  EW + ++ E+ R++  G    N+  ++++  L G GIA +P YL+ 
Sbjct: 186 GHNCLFYSYFRGGLEWSFERRGEVSRIKPRGNIKVNNSEVIRRLLLDGMGIALMPRYLVE 245

Query: 260 EELADGRLHWLLRDYQTRRMPMYLVHPYQGGLPKRTQVLADYL 302
           EELA G L  +L DYQ     +Y + P +  +P R +V  D+L
Sbjct: 246 EELAAGTLVPVLSDYQAPTHGIYALTPERQHMPARLRVFIDFL 288