Pairwise Alignments

Query, 173 a.a., FIG006045: Sigma factor, ECF subfamily from Pseudomonas fluorescens FW300-N2E2

Subject, 171 a.a., RNA polymerase sigma-E factor (sigma-24) protein from Sinorhizobium meliloti 1021

 Score = 62.0 bits (149), Expect = 5e-15
 Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 9/133 (6%)

Query: 24  MVSNPSTAEDLLQETYLR-VTRALAERTVEHLEPFVFQTARNLALDHLRARRIQSRTLLD 82
           +  N + A+DL+QE   R + R+        LE +V+   RNL +D +R R+++S   +D
Sbjct: 28  LARNANDADDLVQEVCERAIARSHLWNGEGRLESWVYAMTRNLWVDEIRKRKVRSAGAVD 87

Query: 83  DVPPEVVHNVVAPQSSAEDAAHAQQLLERLNVSLQALSSRQQQIFILSRLHGHSYQQIAE 142
               +  H     +++AE AA+A Q+ + +    + L+S    +F+L  + GHSY++ AE
Sbjct: 88  VFERDEPH----VEATAEKAAYANQVQKMILSMSEGLAS----VFLLVNVEGHSYRETAE 139

Query: 143 RLGVSLSTVQKEL 155
            LG+ + TV   L
Sbjct: 140 ILGIPVGTVMSRL 152