Pairwise Alignments

Query, 248 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

Subject, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score = 97.4 bits (241), Expect = 5e-25
 Identities = 62/188 (32%), Positives = 91/188 (48%), Gaps = 5/188 (2%)

Query: 51  NLLIGILVTLAVLAILYRLINSYQQRIDAQATLDSLTELPNRRGFDLLAVQALHEAQREP 110
           NL I   V L VL +       YQ+R++  A  D LT   NR+ F+ L   A+  A +E 
Sbjct: 327 NLAISAFVALGVLGLAQMSFRGYQKRLEDMAVRDKLTGAYNRQVFEELVDDAISLANKES 386

Query: 111 KPLTALLMELDDFKRLDTTHGHVATDQLLAGFARDLTQNLRHSDIVCRWSTEAFVVLLKD 170
            PL+  +++LD FK+++  +GH A D +L        +++     +CRW  E FVVLL  
Sbjct: 387 HPLSLAVIDLDHFKQVNDNYGHPAGDLVLQRVVALCQRHIAQVGTLCRWGGEEFVVLLPH 446

Query: 171 IDGQTGLKIAEKIRQRIETQRYFCSGKQLLVTVSIGLTTLQDEDVLHTLLLRTDHALQRA 230
           +  Q   +  E IR  I          Q  VTVSIG+   Q  + L  L  R D A+  A
Sbjct: 447 MTQQEAYQRMESIRAEIAMH-----ASQPQVTVSIGVVQYQQNESLLHLFNRADQAMYTA 501

Query: 231 RQTGCNRI 238
           +  G N++
Sbjct: 502 KSEGRNKV 509



 Score = 24.6 bits (52), Expect = 0.004
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 4  RSPLYSQRKPLLAVVALLGTGFLIIALLGYYAAHASVRDNILK 46
          R  + +++K    +V L+  GF + +L+ Y  AH ++ + I K
Sbjct: 36 RMLIMTRKKFSWILVTLIIFGFFVTSLVSYKVAHDTLEEQINK 78