Pairwise Alignments

Query, 248 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

Subject, 624 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 93.2 bits (230), Expect = 1e-23
 Identities = 55/179 (30%), Positives = 98/179 (54%), Gaps = 3/179 (1%)

Query: 63  LAILYRLINSYQQRIDAQATLDSLTELPNRRGFDLLAVQALHEAQREPKPLTALLMELDD 122
           L I+ R +N   Q++  Q T+DSLT + NR  F+         ++R+  P+  L++++D 
Sbjct: 435 LEIVLRELNEVNQKLTEQTTIDSLTGVKNRAAFNKRLQAEGRISRRQQTPMALLMLDIDH 494

Query: 123 FKRLDTTHGHVATDQLLAGFARDLTQNLRH-SDIVCRWSTEAFVVLLKDIDGQTGLKIAE 181
           FK ++  +GH+A D  L   A  L+  LR  +D+V R+  E F ++L   D +  + +AE
Sbjct: 495 FKNINDKYGHLAGDYTLKAIADTLSAQLRRPTDLVSRFGGEEFAIILPSTDAEGAVAVAE 554

Query: 182 KIRQRIETQRYFCSGKQLLVTVSIGLTT--LQDEDVLHTLLLRTDHALQRARQTGCNRI 238
            IR+ +E          + +TVSIG+++  ++ ++    LL + D AL +A+  G NR+
Sbjct: 555 HIREAVEELTIKWEQFMIPLTVSIGVSSNIIESDEHPLQLLEQADKALYQAKHDGRNRV 613