Pairwise Alignments

Query, 248 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

Subject, 360 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 65/188 (34%), Positives = 93/188 (49%), Gaps = 2/188 (1%)

Query: 53  LIGILVTLAVLAILYRLINSYQQR-IDAQATLDSLTELPNRRGFDLLAVQALHEAQREPK 111
           L G L    VLA  Y    +   R ++  A  D LT L NRRG       A+    R P 
Sbjct: 169 LAGALAGCTVLAYFYEGTRAKAARQLETLAKSDPLTGLANRRGLLDAFGGAVLTRSRAPH 228

Query: 112 PLTALLMELDDFKRLDTTHGHVATDQLLAGFARDLTQNLRHSDIVCRWSTEAFVVLLKDI 171
            L+ L+++LD FK ++  +GH A D +L   A  +   +R +D++ R   E F +LL D 
Sbjct: 229 RLSLLVLDLDHFKSINDRYGHEAGDGVLCHVAHVIKGMIRANDLIARIGGEEFALLLPDT 288

Query: 172 DGQTGLKIAEKIRQRIETQRYFCSGKQLLVTVSIGLTTLQDE-DVLHTLLLRTDHALQRA 230
           D     ++AEKIR+ IE+      G  L VTVSIG+  L  +      L    DH L +A
Sbjct: 289 DLAGAREVAEKIRKAIESTALIGPGGSLSVTVSIGVAELDPQYPDFAALFSSADHRLYQA 348

Query: 231 RQTGCNRI 238
           ++ G NR+
Sbjct: 349 KKAGRNRV 356