Pairwise Alignments

Query, 248 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

Subject, 487 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  107 bits (267), Expect = 5e-28
 Identities = 68/185 (36%), Positives = 100/185 (54%), Gaps = 10/185 (5%)

Query: 58  VTLAVL-AILYRLINSYQQRIDAQATLDSLTELPNRRGFDLLAVQALHEAQREPKPLTAL 116
           +TLA+  A++YR        I  QA  D+LT+L NRR FD    + +   QR   P+T L
Sbjct: 296 LTLALRNAVVYR-------EIKLQADHDALTQLHNRRSFDHRLAEEVDRHQRYGMPMTLL 348

Query: 117 LMELDDFKRLDTTHGHVATDQLLAGFARDLTQNLRHSDIVCRWSTEAFVVLLKDIDGQTG 176
           ++++D FK ++ T+GH A D +L   A+ +    R +D   R+  E F V+L   DG+ G
Sbjct: 349 MLDIDHFKAVNDTYGHPAGDAVLREVAQTMRNACRTTDFAARYGGEEFCVILPHTDGKCG 408

Query: 177 LKIAEKIRQRIETQRYFCSGKQLLVTVSIGLTTLQDEDVL--HTLLLRTDHALQRARQTG 234
              AE++R+R+ + R    GK + VTVSIGL TL     L    L+   D AL  A+  G
Sbjct: 409 RIFAERLRKRLASSRVEVDGKTIAVTVSIGLATLSAAAPLSPERLVCEADGALYAAKAAG 468

Query: 235 CNRIC 239
            N +C
Sbjct: 469 RNIVC 473