Pairwise Alignments

Query, 476 a.a., HtrA protease/chaperone protein from Pseudomonas fluorescens FW300-N2E2

Subject, 490 a.a., PDZ domain-containing protein from Ralstonia solanacearum GMI1000

 Score =  390 bits (1002), Expect = e-113
 Identities = 220/456 (48%), Positives = 292/456 (64%), Gaps = 25/456 (5%)

Query: 25  AVAVELPDFTQLVEQASPAVVNISTTQKLPDRRVSDQQMPDLEGLPPMLR------EFFE 78
           AVAV + DF+ +VE+  PAVVNISTT +         Q   ++GLPP +       EFF 
Sbjct: 53  AVAVPM-DFSAIVERYGPAVVNISTTARA--------QRTSIQGLPPGVSPDDPFAEFFR 103

Query: 79  RGMPQQPRSPGGGRQREAQSLGSGFIISSDGYILTNNHVIADADEILVRLADRSELKAKL 138
           R MPQ P+  G    +  + LGSGFI+S DG ILTN HV+  A E+ V+L DR E KAK+
Sbjct: 104 RFMPQAPQQQG---DQVVKGLGSGFIVSPDGLILTNAHVVDGAQEVSVKLTDRREFKAKV 160

Query: 139 IGTDPRSDVALLKIEGKDLPVLKLGKSQDLKAGQWVVAIGSPFGFDHTVTQGIVSAIGRS 198
           +G D +SDVA+L+I   +LP +++G     K G+ V+AIGSP+GF++TVT GIVSA  RS
Sbjct: 161 LGVDKQSDVAVLRIAASNLPTVQIGSPAGTKVGEPVLAIGSPYGFENTVTAGIVSAKSRS 220

Query: 199 LPNENYVPFIQTDVPINPGNSGGPLFNLAGEVVGINSQIYTRSGGFMGVSFAIPIDVAMD 258
           LP++ YVPFIQTDV +NPGNSGGPLFN  GEV+GINSQIY+++GG+ G+SFA+PIDVAM 
Sbjct: 221 LPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVIGINSQIYSQTGGYQGLSFAVPIDVAMK 280

Query: 259 VSNQLKSEGKVSRGWLGVVIQEVNKDLAESFGLEKPAGALVAQIQEGGPAAKGGLQVGDV 318
           V  QL + GKV+RG LG+ +QEV++ LA+SF L KP GALV  +++ GPAAK GLQ GDV
Sbjct: 281 VEQQLVATGKVTRGRLGISVQEVDQSLADSFNLPKPEGALVNAVEKDGPAAKAGLQPGDV 340

Query: 319 ILSMNGQPIVMSADLPHLVGALKAGAKANLEVIREGKRKNVELTVGAIPEEGKELDSLPK 378
           IL +    I  S DLP  V  +K G+   L++IR GK   + +TVG    E K+      
Sbjct: 341 ILQIGDVHIGHSGDLPEQVAEIKPGSTVPLQIIRHGKPTALSVTVG----EAKDAKVAAN 396

Query: 379 SGVERSSNRLGVAVAELTEEQKRTLELQGGVVIKEVQDGPAALIGLQPGDIITHLNNQAI 438
           +       RLG+AV  L  E+KR   L GG+V+ +   GPAA  G+QPGD+I  LN   +
Sbjct: 397 TSAAPDKGRLGLAVRPLQAEEKRQSGLPGGLVVMD-SSGPAAKAGIQPGDVILSLNGTPV 455

Query: 439 GSAKEFTDIAKALPKNRSVSMRVLRQGRASFITFKL 474
            SA+E   +     K+  V++ V R     F+   L
Sbjct: 456 SSAQELRALVDRAGKH--VALLVQRDDAKIFVPLDL 489



 Score = 50.4 bits (119), Expect = 1e-10
 Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 3/93 (3%)

Query: 387 RLGVAVAELTEEQKRTLEL---QGGVVIKEVQDGPAALIGLQPGDIITHLNNQAIGSAKE 443
           RLG++V E+ +    +  L   +G +V    +DGPAA  GLQPGD+I  + +  IG + +
Sbjct: 295 RLGISVQEVDQSLADSFNLPKPEGALVNAVEKDGPAAKAGLQPGDVILQIGDVHIGHSGD 354

Query: 444 FTDIAKALPKNRSVSMRVLRQGRASFITFKLAE 476
             +    +    +V ++++R G+ + ++  + E
Sbjct: 355 LPEQVAEIKPGSTVPLQIIRHGKPTALSVTVGE 387