Pairwise Alignments

Query, 476 a.a., HtrA protease/chaperone protein from Pseudomonas fluorescens FW300-N2E2

Subject, 450 a.a., protease Do (RefSeq) from Shewanella loihica PV-4

 Score =  280 bits (717), Expect = 5e-80
 Identities = 187/483 (38%), Positives = 271/483 (56%), Gaps = 48/483 (9%)

Query: 6   LKTYLSILATVLV---------LGQAVPAVAVE---LPDFTQLVEQASPAVVNISTTQKL 53
           +KT LS+L+  L+         + QA   +AVE   LP    ++E+ +PAVV ++ +   
Sbjct: 1   MKTKLSLLSAALLGASLMVMPAVSQAAIPLAVEGQALPSLAPMLEKTTPAVVAVAVS--- 57

Query: 54  PDRRVSDQQMPDLEGLPPMLREFFERGMPQQPRSPGGGRQREAQSLGSGFIISSD-GYIL 112
               VS Q++PD        R FF    P++       ++R  + LGSG II +  GYI+
Sbjct: 58  -GTHVSKQRLPDA------FRYFFGPNAPREQV-----QERPFKGLGSGVIIDAKKGYIV 105

Query: 113 TNNHVIADADEILVRLADRSELKAKLIGTDPRSDVALLKIEGKDLPVLKLGKSQDLKAGQ 172
           TNNHVI  ADEIL+ L D  E++AKLIGTD  SDVALL+IE K+L  LK   S +LK G 
Sbjct: 106 TNNHVIEGADEILIGLHDGREIEAKLIGTDAESDVALLQIEAKNLVALKRADSDELKVGD 165

Query: 173 WVVAIGSPFGFDHTVTQGIVSAIGRS-LPNENYVPFIQTDVPINPGNSGGPLFNLAGEVV 231
           + VAIG+PFG   TVT GIVSA+GRS L  E    FIQTD  IN GNSGG L NL GE++
Sbjct: 166 FAVAIGNPFGLGQTVTSGIVSAMGRSGLGIEMLENFIQTDAAINSGNSGGALVNLNGELI 225

Query: 232 GINSQIYTRSGGFMGVSFAIPIDVAMDVSNQLKSEGKVSRGWLGVVIQEVNKDLAESFGL 291
           GIN+ I    GG +G+ FAIP ++  ++ +QL   G+V RG LGV  ++++ +LA+ FGL
Sbjct: 226 GINTAIVAPGGGNVGIGFAIPANMVNNLVDQLIEHGEVRRGVLGVSGRDLDSELAQGFGL 285

Query: 292 EKPAGALVAQIQEGGPAAKGGLQVGDVILSMNGQPIVMSADLPHLVGALKAGAKANLEVI 351
           +   G  V ++     A K G++ GD+I+S+N +PI    +L   +G + AGAK  L +I
Sbjct: 286 DSQHGGFVNEVMPDSAADKAGIKAGDIIVSVNDKPIKSFQELRAKIGTMGAGAKVKLGLI 345

Query: 352 REGKRKNVELTVGAIPEEGKELDSLPKSGVERSSNRLGVAVAELTEEQKRTLELQGGVVI 411
           R+G  K V   +G   ++            E ++  +   +A  T E  +      GV I
Sbjct: 346 RDGDEKTVTAVLGEASQQ-----------TETAAGAVHPMLAGATLENNKK-----GVEI 389

Query: 412 KEVQDG-PAALIGLQPGDIITHLNNQAIGSAKEFTDIAKALPKNRSVSMRVLRQGRASFI 470
            E+  G PAA  GL  GDII  +N   I   KE    A+   ++ +V++++LR   + ++
Sbjct: 390 TEIAQGSPAAASGLLKGDIIVGVNRTRIEDLKELK--AELKEQHGAVALKLLRGDNSLYL 447

Query: 471 TFK 473
             +
Sbjct: 448 VLR 450



 Score = 35.4 bits (80), Expect = 4e-06
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 3/92 (3%)

Query: 388 LGVAVAELTEEQKRTLELQ---GGVVIKEVQDGPAALIGLQPGDIITHLNNQAIGSAKEF 444
           LGV+  +L  E  +   L    GG V + + D  A   G++ GDII  +N++ I S +E 
Sbjct: 268 LGVSGRDLDSELAQGFGLDSQHGGFVNEVMPDSAADKAGIKAGDIIVSVNDKPIKSFQEL 327

Query: 445 TDIAKALPKNRSVSMRVLRQGRASFITFKLAE 476
                 +     V + ++R G    +T  L E
Sbjct: 328 RAKIGTMGAGAKVKLGLIRDGDEKTVTAVLGE 359