Pairwise Alignments

Query, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

Subject, 301 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  135 bits (341), Expect = 9e-37
 Identities = 88/288 (30%), Positives = 146/288 (50%), Gaps = 4/288 (1%)

Query: 5   RVTLDQWRTLQAVVDHGGFAQAAEVLHRSQSSVSYTVARMQDQLGVPLLRIDGRKAVLTE 64
           ++ ++ +R L  +V+ G F++AAE LH++QS+VSY V +++  LGV L   D  +A LT 
Sbjct: 2   KIDVEAFRVLSILVEEGSFSKAAERLHKAQSAVSYQVKKLEQHLGVKLFCRDQYRAELTP 61

Query: 65  AGGVLLRRSRQLVKQASQLEDLAHHMEQGWEAEVRLVVDAAYPNARLVRALTAFMPQSRG 124
            G V+L   ++L++    +E LA    +GWE ++ LVVD + P   ++RAL         
Sbjct: 62  EGKVILAEGKRLLQYLGNIEHLASRFSEGWEPKLELVVDGSLPMEPIMRALKRVSEHKIP 121

Query: 125 CRVRLREEVLSGVEEVLLEGVADLAI--SGFSIPGYLGAELSDVEFIAVAHPEHALHRLN 182
            +++L  E L GV+       ADL +     + P Y    L D+  I V    H L +  
Sbjct: 122 TKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPNYRPQPLPDINSILVVSRSHPLAKA- 180

Query: 183 RELNFQDLESQLQVVIRDSGRQQ-PRDVGWLGAEQRWTVGSLATAASFVGSGLGFAWLPR 241
           +EL+  +L   +++ I DS   +   D    G ++ + +       + +  GLGF W+P 
Sbjct: 181 KELSLFELLQHVELTIEDSSPGKIHSDELQFGGDKVFYLSGFIMKKNALLMGLGFGWMPD 240

Query: 242 HMIERELKEGVLKRLPLEQGGSRNSTFYLFSNKEKPLGPATQILIELL 289
            +I+ EL  G L+ L    G   + T  L S  E+PLG A ++   L+
Sbjct: 241 FLIQEELASGELQELDFLGGSRYSFTPQLVSTMERPLGRAGRLFTSLI 288