Pairwise Alignments

Query, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

Subject, 303 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  242 bits (617), Expect = 9e-69
 Identities = 130/290 (44%), Positives = 181/290 (62%), Gaps = 1/290 (0%)

Query: 1   MKAPRVTLDQWRTLQAVVDHGGFAQAAEVLHRSQSSVSYTVARMQDQLGVPLLRIDGRKA 60
           M   + T +QWR LQAVVD GG+AQAAE L++SQSS+++ VA++Q QLGV LL + GRKA
Sbjct: 1   MSQAKSTFEQWRILQAVVDCGGYAQAAEKLNKSQSSLNHAVAKLQTQLGVALLEVRGRKA 60

Query: 61  VLTEAGGVLLRRSRQLVKQASQLEDLAHHMEQGWEAEVRLVVDAAYPNARLVRALTAFMP 120
            LTE+G VLLRRSR + +  S+LE LA ++E+GWE  + +  +  YP   L+ AL  F P
Sbjct: 61  YLTESGEVLLRRSRHITRSVSELEQLASNLEKGWEPSLLISREMIYPMEHLIDALAEFEP 120

Query: 121 QSRGCRVRLREEVLSGVEEVLLEGVADLAISGFSIP-GYLGAELSDVEFIAVAHPEHALH 179
           Q RG R+ + + V+SG  E++     DLAI G + P G+L   L +V+F  V HP H L 
Sbjct: 121 QGRGTRITILDSVISGSAELVESEAVDLAIIGGAPPKGHLAQPLCNVDFHLVCHPSHPLA 180

Query: 180 RLNRELNFQDLESQLQVVIRDSGRQQPRDVGWLGAEQRWTVGSLATAASFVGSGLGFAWL 239
            +   L+ Q L  QLQ+VI+D+G+    ++GWL AE+RWTV +   A   +  GLGF W+
Sbjct: 181 SMELPLDDQTLAEQLQIVIKDTGQIARGELGWLKAERRWTVANFHEALVVLSKGLGFCWI 240

Query: 240 PRHMIERELKEGVLKRLPLEQGGSRNSTFYLFSNKEKPLGPATQILIELL 289
           P H+I   +KEG L RL L+    R     L        GPA+Q+L +L+
Sbjct: 241 PSHLICDAIKEGRLTRLTLKGSSHRQVPLSLVIPNRDKQGPASQLLEQLI 290