Pairwise Alignments

Query, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

Subject, 300 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  102 bits (255), Expect = 8e-27
 Identities = 67/244 (27%), Positives = 115/244 (47%), Gaps = 5/244 (2%)

Query: 21  GGFAQAAEVLHRSQSSVSYTVARMQDQLGVPLLRIDGRKAVLTEAGGVLLRRSRQLVKQA 80
           G F  AA  LH+  S+VSY V +++++LGV L     R   LT AGG  ++++R L+ Q 
Sbjct: 17  GSFTAAANRLHKVPSAVSYAVKQIEEELGVVLFERHHRSVTLTPAGGHFVKQARNLLTQI 76

Query: 81  SQLEDLAHHMEQGWEAEVRLVVDAAYPNARLVRALTAFMPQSRGCRVRLREEVLSGVEEV 140
            +++     +  GW+  + + +D      R+   +  F        + +R EV +GV E 
Sbjct: 77  DEMKRGTQRVANGWQPTLSIALDNIVRADRISVLIADFYRHFHDIELIIRIEVFNGVWEA 136

Query: 141 LLEGVADLAISGFSIPGYLGA----ELSDVEFIAVAHPEHALHRLNRELNFQDLESQLQV 196
           L  G +D+AI   +     G     ++ D+E+  +    H L  ++R L  ++L     +
Sbjct: 137 LATGHSDVAIGATTAIPVGGVFQYKDMGDIEWAFLVSKNHPLANIDRPLTDEELRPFPSI 196

Query: 197 VIRDSGRQQPRDVGWLGAEQ-RWTVGSLATAASFVGSGLGFAWLPRHMIERELKEGVLKR 255
            + D+ R+ P+ + WL   Q R  V     A +    GLG  ++P H+    +K G L  
Sbjct: 197 CLEDTSREIPKRMTWLLENQRRLVVPDWIRAINCFREGLGIGYMPVHLASVFIKAGALVE 256

Query: 256 LPLE 259
             LE
Sbjct: 257 KQLE 260