Pairwise Alignments

Query, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

Subject, 293 a.a., HTH-type transcriptional activator AllS from Enterobacter sp. TBS_079

 Score =  164 bits (414), Expect = 3e-45
 Identities = 105/296 (35%), Positives = 158/296 (53%), Gaps = 8/296 (2%)

Query: 5   RVTLDQWRTLQAVVDHGGFAQAAEVLHRSQSSVSYTVARMQDQLGVPLLRIDGRKAVLTE 64
           + TL+QW  L+ VV+ G FA+AAE  +RSQSSVSY ++ +Q++LGV LL  +GR+AVLT 
Sbjct: 3   KTTLEQWSLLERVVEAGSFAKAAEETNRSQSSVSYNLSLLQERLGVALLVPEGRRAVLTP 62

Query: 65  AGGVLLRRSRQLVKQASQLEDLAHHMEQGWEAEVRLVVDAAYPNARLVRALTAFMPQSRG 124
           AG +LL + + L+K  + +E  A  +  G    + LVVD+ +P  RL   L  F      
Sbjct: 63  AGELLLNQVKPLLKAFAYVETRAASLRNGMRTRLDLVVDSIFPRRRLFAILRQFQQLYPQ 122

Query: 125 CRVRLREEVLSGVEEVLLEGVADLAISGFSIPGYLGAELSDVEFIAVAHPEHALHRLNRE 184
            +VRL E + +   +V+ +    + ++       LG  L +++F+AVAH +H L  L+  
Sbjct: 123 TQVRLTEVLENSRTDVINDEADVMVLTRRQDITGLGEWLMNIDFVAVAHHQHPLFSLDAP 182

Query: 185 LNFQDLESQLQVVIRDSGRQQPRDVGWLGAEQRWTVGSLATAASFVGSGLGFAWLPRHMI 244
           LN   L     + I DS            A + WT  ++  A   V S +G+ WLP   I
Sbjct: 183 LNDDMLRPWPLIQIADS------QTAARAAGESWTFSTIDAAIEAVMSQVGYGWLPEERI 236

Query: 245 ERELKEGVLKRLPLEQGGSRNSTFYLFSNKEKPLGPATQILIELLRTFDTAPLDAP 300
           + +L  GVLKRLPL  G  R +  +L    ++ LGP  + +  LLR F   P  +P
Sbjct: 237 QTQLDLGVLKRLPLSHGARRATPLHLI--VKRSLGPLDEQVETLLRLFSQEPPSSP 290