Pairwise Alignments

Query, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  117 bits (292), Expect = 4e-31
 Identities = 83/293 (28%), Positives = 148/293 (50%), Gaps = 12/293 (4%)

Query: 6   VTLDQWRTLQAVVDHGGFAQAAEVLHRSQSSVSYTVARMQDQLGVPLLRIDGRKAVLTEA 65
           +TL+Q      V   G    A++ LH++Q ++S ++ +++ QL + L    G +  LT+ 
Sbjct: 1   MTLEQLLMFNTVALAGSLKAASDKLHKTQPAISQSIKQLESQLDLVLFDRQGYRLTLTQE 60

Query: 66  GGVLLRRSRQLVKQASQLEDLAHHMEQGWEAEVRLVVDAAYPNARLVRALTAFMPQSRGC 125
           G  LL+ +++++ +A ++  +A H+ +G EA + L  +A++   R++  L     +    
Sbjct: 61  GRKLLQYAQRVLNEAQEMRQVAKHLAKGNEASITLAFEASFNLTRILPILERTQNEFPHT 120

Query: 126 RVRLREEVLSGVEEVLLEGVADLAISGFSIPGYLG-----AELSDVEFIAVAHPEHALHR 180
           ++ L++E L+G  E L +G AD+AIS   I          A L     + VA P   L R
Sbjct: 121 QIILKQEYLTGALEALNQGKADIAISAGGIEPIRSSHFELAYLFSGSLLDVASP-RLLSR 179

Query: 181 LNRELNFQDLESQLQVVIRDSGRQQPR-DVGWLGAEQRWTVGSLATAASFVGSGLGFAWL 239
                + ++L ++ Q+VI+D+G      + G    ++RW V    T    + SG+G+  L
Sbjct: 180 HPTLGHVRELVNEYQIVIQDTGTGTANIEFGVQAGQRRWYVNDFYTKRMLIQSGMGWGKL 239

Query: 240 PRHMIERELKEGVLKRLPLEQGGSRN---STFYLFSNKEKPLGPATQILIELL 289
           P +++E+ L +G L  LPLE    +N     +Y+      PLGP  Q L E L
Sbjct: 240 PHYLVEQALADGSL--LPLELRERQNLIQLDYYVMRPPHSPLGPVAQALWENL 290