Pairwise Alignments

Query, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas fluorescens FW300-N2E2

Subject, 607 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella amazonensis SB2B

 Score =  536 bits (1381), Expect = e-156
 Identities = 286/584 (48%), Positives = 388/584 (66%), Gaps = 3/584 (0%)

Query: 9   LKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVVVSPLIA 68
           L+ +FGY  FR  Q  ++ RV  G D LV+MPTGGGKSLC+QVPAL+  G+ +VVSPLI+
Sbjct: 17  LQQVFGYRDFRPGQREVMTRVCQGEDCLVIMPTGGGKSLCYQVPALVLPGVTLVVSPLIS 76

Query: 69  LMDDQVATLEELGVAAASLNSTLSAEQQRDLATRIRRGEVKMLYLAPERLVQPRMLAFLQ 128
           LM DQV +L + GVAAA LNS+   EQ  ++  ++R GE+K+LY++PERL+Q   L+ L 
Sbjct: 77  LMKDQVDSLIQSGVAAAYLNSSQPREQAIEVLRQLRFGELKLLYVSPERLLQGDFLSRLD 136

Query: 129 SLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTREEIVERL 188
            L I+LFA+DEAHC+S+WGHDFR EY  LGQL + FP VP +ALTATAD+ TR  I ERL
Sbjct: 137 ELHISLFAVDEAHCISEWGHDFRPEYAALGQLKQRFPHVPVMALTATADEATRSSICERL 196

Query: 189 HLQDAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRSDAGIVYCLSRKKVDEVAAFL 248
            +Q  +  L+SFDRPNI Y +  K     QL  F+  ++   GIVYC SR++VDEVA  L
Sbjct: 197 GIQPFQH-LASFDRPNIRYTVAEKLNAANQLRQFIQSQKGANGIVYCSSRRRVDEVAERL 255

Query: 249 CEQGFPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFVAHLDLPKS 308
            +QGF A  YHAG+  D RA  Q RFL ++  ++VAT+AFGMGI+K NVRFV H D+PKS
Sbjct: 256 RQQGFYAEGYHAGMTQDERASVQDRFLKDQIDVVVATVAFGMGINKSNVRFVVHYDIPKS 315

Query: 309 LEAYYQETGRAGRDGLPADAWMAYGLQDVVMLKQMLQSSEGDERHKRLEQHKLDAMLSLC 368
           +E+YYQETGRAGRDGL A+A + +   D+  ++ +++  E   + +++E HKL +M +  
Sbjct: 316 IESYYQETGRAGRDGLDAEALLLFDPADIGRVRHLIEQQEPGPQ-QQVEFHKLYSMAAFA 374

Query: 369 EETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVETWDATEPARQALSAIFRTGQRYGVGHL 428
           E   CRRQ LL YF E   +PCG+CD C+D  + ++ TE A++ LS I+R  QR+GV HL
Sbjct: 375 EAQTCRRQVLLHYFGEAANEPCGNCDICIDPPKRYNGTEDAQKVLSCIYRLNQRFGVNHL 434

Query: 429 VDVLLGKDNEKVRSFGHQHLSVFGVGKARTESEWRSLFRQLVARGLADIDLEGYGGLRLS 488
           ++VL G     V   GH  LS +G+GK ++   W S+ RQL+  GLA  D+     +RL+
Sbjct: 435 IEVLRGSKAASVVDRGHDKLSTWGIGKEKSTEYWLSVTRQLIHLGLASQDITRGSSVRLN 494

Query: 489 ATCRPLLKGEVTLELRRDLKPATAVKSSKSQASQLVRGEERDQWEALRALRRKLAEEHGV 548
           +  RP+LKGEV L L       + V   K  +S+  +  +R  +  L+ LRR +AEE  V
Sbjct: 495 SAARPVLKGEVALMLAEPRLSLSDV-PRKRTSSRTPQNYDRKLFARLKNLRRTIAEEQDV 553

Query: 549 PPYVIFPDSTLLEMLRSQPTSLAEMARVSGVGARKLERYGEAFL 592
           PPY++F D+TL EM    P S AE+  V+GVG RKL R+G  FL
Sbjct: 554 PPYLVFNDATLAEMAWMLPKSEAELLAVNGVGERKLARFGGEFL 597