Pairwise Alignments

Query, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas fluorescens FW300-N2E2

Subject, 629 a.a., ATP-dependent DNA helicase RecQ (NCBI) from Rhodospirillum rubrum S1H

 Score =  555 bits (1430), Expect = e-162
 Identities = 282/599 (47%), Positives = 394/599 (65%), Gaps = 7/599 (1%)

Query: 3   EQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVV 62
           + A+ +L DI+G+  FR  Q AII  V  G D L +MPTG GKSLC+Q+PAL+R G+ +V
Sbjct: 29  DPARVLLADIWGFKDFRPGQEAIIRAVLGGEDVLAVMPTGSGKSLCYQLPALMRQGVTLV 88

Query: 63  VSPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLATRIRRGEVKMLYLAPERLVQPR 122
           VSPLIALM DQVA L+ LGVAA +LNS++  +  R +   +R G +K+LY+APERL +P 
Sbjct: 89  VSPLIALMRDQVAQLDALGVAAGALNSSIDMDGYRRVMDGLRGGRLKLLYVAPERLARPD 148

Query: 123 MLAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTRE 182
            L+ L+   +   AIDEAHCVSQWGHDFR +YL LG++ E    V  +A TATAD  TR+
Sbjct: 149 TLSLLRDSGVTALAIDEAHCVSQWGHDFRPDYLCLGKVREDLGGVQTVAFTATADAATRD 208

Query: 183 EIVERLHLQDAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRSDAGIVYCLSRKKVD 242
           +I  RL       F+  FDRPN+   + PK   R+++  F+A    ++G++YC SR + +
Sbjct: 209 DIAGRLFPAPPRLFIGGFDRPNLRLAMRPKGDTRRRMFEFVAAHTGESGVIYCGSRARTE 268

Query: 243 EVAAFLCEQGFPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFVAH 302
           E+A  L   G  ALPYHAGL   +R  +Q  FL E+GL+MVAT+AFGMGIDKP+VRFV H
Sbjct: 269 ELAEGLRGAGHRALPYHAGLDKPVRDANQDAFLAEDGLVMVATVAFGMGIDKPDVRFVCH 328

Query: 303 LDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVVMLKQMLQSSEGDERHKRLEQHKLD 362
            D+P+S+EAYYQE GRAGRDGL AD    YGL DV + +  ++ S+  +  KR+E  +L+
Sbjct: 329 ADMPRSIEAYYQEIGRAGRDGLAADTLTFYGLDDVRLHRMRIEESQAGDEQKRVEIQRLN 388

Query: 363 AMLSLCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVETWDATEPARQALSAIFRTGQR 422
           A+L+LCE  RCRRQTLL YF E   +PCG+CD C++GVE++D T  A++A+SA+ RTGQR
Sbjct: 389 ALLALCEAPRCRRQTLLGYFGE-RTEPCGNCDLCINGVESFDGTIEAQKAMSAMLRTGQR 447

Query: 423 YGVGHLVDVLLGKDNEKVRSFGHQHLSVFGVGKARTESEWRSLFRQLVARGLADIDLEGY 482
           +   HL+++L+G   + +  +GH  L  FGVGK  T + WRS+FRQ+ A GL  +D+  +
Sbjct: 448 FATEHLINILVGTQTDAITQYGHDKLPTFGVGKDHTRNVWRSIFRQISAGGLISLDIANH 507

Query: 483 GGLRLSATCRPLLKGEVTLELRRDLKPATAVKSSK------SQASQLVRGEERDQWEALR 536
           G   ++   R +L+G+  + LR D+  A      K      S  +  +  ++R  ++ALR
Sbjct: 508 GRWLMTEAGRAVLRGQAGVALRSDVLEAAGRGERKDKERRASAPAVQLEADDRALFDALR 567

Query: 537 ALRRKLAEEHGVPPYVIFPDSTLLEMLRSQPTSLAEMARVSGVGARKLERYGEAFLQVL 595
           A R++LA    VP YV+F D TL+E+   +P SL  M  + G+G  KL RYG AFL+V+
Sbjct: 568 AKRQELARAENVPAYVVFADRTLIELATKRPPSLDAMREIHGIGQSKLARYGAAFLEVI 626