Pairwise Alignments

Query, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas fluorescens FW300-N2E2

Subject, 616 a.a., DNA helicase RecQ from Rhodopseudomonas palustris CGA009

 Score =  644 bits (1661), Expect = 0.0
 Identities = 335/602 (55%), Positives = 430/602 (71%), Gaps = 13/602 (2%)

Query: 4   QAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVVV 63
           +A  VL  +FG  SFRG+Q AI+  VA GGDALVLMPTGGGKSLC+Q+PALLR G  VVV
Sbjct: 16  RALSVLNHVFGLPSFRGQQEAIVRHVADGGDALVLMPTGGGKSLCYQLPALLREGCGVVV 75

Query: 64  SPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLATRIRRGEVKMLYLAPERLVQPRM 123
           SPLIALM DQVA L E GV AA+LNSTLS ++  D+  ++ +GE+ +LY+APERL+ PR 
Sbjct: 76  SPLIALMRDQVAGLLESGVRAAALNSTLSYDEANDIEQQLLKGELDLLYVAPERLLTPRC 135

Query: 124 LAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTREE 183
           L+ L   +I+LFAIDEAHCVSQWGHDFR EY+ L  +AE FP+VPRIALTATAD  TR E
Sbjct: 136 LSLLARAKISLFAIDEAHCVSQWGHDFRPEYVGLSAIAEKFPNVPRIALTATADALTRRE 195

Query: 184 IVERLHLQDAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLAER-RSDAGIVYCLSRKKVD 242
           I ERL L DA  F+SSFDRPNI Y IV K+    QL AF+ +R R  +G+VYCLSR KV+
Sbjct: 196 IAERLSLTDAPCFVSSFDRPNIRYSIVDKQNAPAQLKAFIDDRHRGHSGVVYCLSRAKVE 255

Query: 243 EVAAFLCEQGFPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFVAH 302
           ++A  L + G  ALPYHAGLP D+RA +Q RFLNE+G+++VATIAFGMGIDKP+VRFVAH
Sbjct: 256 DIAETLSKSGLTALPYHAGLPPDVRARNQDRFLNEDGIVIVATIAFGMGIDKPDVRFVAH 315

Query: 303 LDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVVMLKQMLQSSEGDERHKRLEQHKLD 362
           LDLPKS+EAYYQETGRAGRDG P++AWMAYGL D+V  ++M+  S G +  KR+   KLD
Sbjct: 316 LDLPKSIEAYYQETGRAGRDGKPSEAWMAYGLSDIVQQRRMIDESSGSDAFKRVSMGKLD 375

Query: 363 AMLSLCEETRCRRQTLLAYFDED-MPQPCGHCDNCVDGVETWDATEPARQALSAIFRTGQ 421
           A++ LCE T CRR  LL YF E    + CG+CDNC+   +  D T PA++ LS  +RTGQ
Sbjct: 376 ALVGLCESTGCRRTRLLGYFGETAQHESCGNCDNCLTPPKVIDGTVPAQKLLSCAYRTGQ 435

Query: 422 RYGVGHLVDVLLGKDNEKVRSFGHQHLSVFGVGKARTESEWRSLFRQLVARGLADIDLEG 481
           R+G  HL+DVLLG+  ++V  FGH  LSVFG+G    E +WR++ RQLV+ G    D E 
Sbjct: 436 RFGAQHLIDVLLGRLTDRVTQFGHDKLSVFGIGGEFGEKQWRAVIRQLVSLGHLAPDSEA 495

Query: 482 YGGLRLSATCRPLLKGEVTLELRRDL-KPATAVKSSKSQASQLVRGEERDQ------WEA 534
           +G L+L+ T R +LKGE  + LR    +P  A    KS+   LV G +R+       + A
Sbjct: 496 FGALKLTETSRAVLKGETQVMLREQTGRPPRA----KSRRGDLVGGAQRETSGDPALFAA 551

Query: 535 LRALRRKLAEEHGVPPYVIFPDSTLLEMLRSQPTSLAEMARVSGVGARKLERYGEAFLQV 594
           L+A R ++A+  GVP YV+  D+TL  +  ++P +L E+  ++G+G +KL+ YG A L V
Sbjct: 552 LKAWRSEVAKARGVPAYVVLHDATLDGLAAAKPRTLDELRGIAGIGDKKLDHYGAALLAV 611

Query: 595 LG 596
           +G
Sbjct: 612 IG 613