Pairwise Alignments

Query, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas fluorescens FW300-N2E2

Subject, 615 a.a., ATP-dependent DNA helicase RecQ from Burkholderia phytofirmans PsJN

 Score =  667 bits (1720), Expect = 0.0
 Identities = 338/611 (55%), Positives = 435/611 (71%), Gaps = 22/611 (3%)

Query: 8   VLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRN----GLAVVV 63
           +L ++FGY +FRG+QG I+E VA GGD LVLMPTGGGKSLC+Q+P+L+R     G  +VV
Sbjct: 7   ILNEVFGYPAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPSLVRREGGFGTGIVV 66

Query: 64  SPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLATRIRRGEVKMLYLAPERLVQPRM 123
           SPLIALM DQVA L E+GV AA LNSTLS+ +       +R G++ +LY+APERL+ PR 
Sbjct: 67  SPLIALMQDQVAALTEVGVRAAYLNSTLSSAEAMATERALRDGDIDLLYVAPERLMTPRF 126

Query: 124 LAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTREE 183
              L+   I LFAIDEAHCVSQWGHDFR EY+QL  L E FP+VPRIALTATAD  TR+E
Sbjct: 127 QELLERTRIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPNVPRIALTATADDITRDE 186

Query: 184 IVERLHLQDAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS------DAGIVYCLS 237
           I+ RL L DA  F+SSFDRPNI YRIV K+  R QLL F+    S      DAG+VYCLS
Sbjct: 187 IIHRLALDDARVFVSSFDRPNIRYRIVEKDNARAQLLDFIRAEHSKPDGTTDAGVVYCLS 246

Query: 238 RKKVDEVAAFLCEQGFPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKPNV 297
           R+KV+E A +L E+G  ALPYHAG+  ++R  HQ+ F  EEG++M ATIAFGMGIDKP+V
Sbjct: 247 RRKVEETAEWLKEKGMSALPYHAGMEFEIRQKHQEMFQREEGIVMCATIAFGMGIDKPDV 306

Query: 298 RFVAHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVVMLKQMLQSSEGDERHKRLE 357
           RFVAHLDLPKS+E YYQETGRAGRDG+PA+AWMAYGL DVV  ++M+  S+ D+ HKR++
Sbjct: 307 RFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESDADDAHKRVQ 366

Query: 358 QHKLDAMLSLCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVETWDATEPARQALSAIF 417
             KLDA+L LCE   CRR  LL YF E   +PCG+CDNC++  +TWDAT  AR ALS +F
Sbjct: 367 TGKLDALLGLCEAATCRRVRLLGYFGES-SKPCGNCDNCLEPPDTWDATREARMALSCVF 425

Query: 418 R----TGQRYGVGHLVDVLLGKDNEKVRSFGHQHLSVFGVGKARTESEWRSLFRQLVARG 473
           R    +G  +G GHL+D+L G  +EK+   GH+ L+ FG+G A  E EWR++FRQLVA G
Sbjct: 426 RAQRASGFHFGAGHLIDILRGNSSEKILQRGHEKLTTFGIGSALGEQEWRAVFRQLVAFG 485

Query: 474 LADIDLEGYGGLRLSATCRPLLKGEVTLELRRDLKPATAVKSSKSQASQL------VRGE 527
              +D EG+G L L+   +P+LKGE  + +RR +KP T  + S  + S+       +   
Sbjct: 486 YLTVDHEGFGSLVLTEASKPVLKGEQNVTMRRYVKP-TRTRQSSGRTSERADPTIGMGPR 544

Query: 528 ERDQWEALRALRRKLAEEHGVPPYVIFPDSTLLEMLRSQPTSLAEMARVSGVGARKLERY 587
           ER +WE LRA R + A+  GVP YVIF D+TL E+ R+ P S+ ++  + G+GARKL+R+
Sbjct: 545 ERARWERLRAWRTETAKSDGVPAYVIFHDATLAEIARNGPDSIDDLRGIPGMGARKLDRF 604

Query: 588 GEAFLQVLGGE 598
           G+  L+V+  +
Sbjct: 605 GDELLEVVAAD 615