Pairwise Alignments

Query, 353 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

Subject, 343 a.a., helix-turn-helix domain containing protein, AraC type from Marinobacter adhaerens HP15

 Score =  128 bits (322), Expect = 2e-34
 Identities = 91/331 (27%), Positives = 153/331 (46%), Gaps = 2/331 (0%)

Query: 1   MNERTTSSSWAMGIVKALEIDGLDCRVLFKQLGLDFDALDDPDARFSQDSMTRLWQRAVE 60
           M++ T S  +    +   E  G D R + ++ G+  D L    AR S D  + L Q    
Sbjct: 5   MSDLTVSKHFVQAALGGAERLGFDTREMLREAGISPDLLRIEMARVSSDQFSHLMQVLWN 64

Query: 61  LSGNPAIGLNMGKVVRPASFHVAGYALMSSRTLAEGFQRLVRYQRIIAESADLSFRRLEE 120
             G+  +GL   +  R  +F      ++    L   +++  ++ R+      +     E+
Sbjct: 65  RMGDEFMGLGPRRA-RTGTFATMCALVIDCPNLESVYRQAFQFSRLFEPMVSMELEIGED 123

Query: 121 GYGLILTVHGDHLPPTRQSAEASLACALALCNWLTGRTLHPVKVLFQGTEPLDLAPYQRA 180
              L+  + G+   P+    E+ L     L +WL G+ +   K  F    P     Y+  
Sbjct: 124 KARLVARMEGEINDPSFFLRESILVIWHRLGSWLIGQPIELEKAEFDYPRPPHGDEYRHI 183

Query: 181 FCAPLEFGASYDALIFERADMEAPLPTANEAMAQLHDRFAGEYLARFSESRV-THKARQI 239
           F  PL F +   AL F++  + AP+      M Q       + L+R  ES   T + R +
Sbjct: 184 FHCPLAFESDRIALTFDKRFLSAPVIRDKPEMRQFLKTSPADLLSRPDESNTFTGRIRAL 243

Query: 240 LCRLLPQGEPKRDVVAQTLHLSQRTLQRRLQEEGTSFQSLLEDTRRELAEQYLAQPGMTL 299
           + R   +  P  + +A  LH S +TL+RRL++E TSFQ + +  RR++A  YL++  + +
Sbjct: 244 IGRDFSKPLPDFEWIAAELHTSPQTLRRRLKQENTSFQEIKDLLRRDMAIYYLSRQDLPI 303

Query: 300 LEIAYLLGFADPSNFFRAFRRWFDTTPGEYR 330
            +IA  +GF +PS F RAF++W   TPG YR
Sbjct: 304 NDIAAKVGFTEPSTFHRAFKKWTGVTPGAYR 334