Pairwise Alignments

Query, 353 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

Subject, 338 a.a., AraC-like DNA-binding protein from Paraburkholderia graminis OAS925

 Score =  126 bits (317), Expect = 7e-34
 Identities = 83/335 (24%), Positives = 159/335 (47%), Gaps = 8/335 (2%)

Query: 1   MNERTTSSSWAMGIVKALEI----DGLDCRVLFKQLGLDFDALDDPDARFSQDSMTRLWQ 56
           MN+     + ++G+V+   +      LD   + +  G+  + L+ P AR    + +RLW 
Sbjct: 1   MNDAQDKGTTSIGLVREAILVATQRNLDVSAVLQHAGIAAELLNAPRARVPALAFSRLWA 60

Query: 57  RAVELSGNPAIGLNMGKVVRPASFHVAGYALMSSRTLAEGFQRLVRYQRIIAESADLSFR 116
              +L  +   GL+    +R  S+ +  +A++ +  L    +R++++ R + +      R
Sbjct: 61  ALADLMDDEFFGLD-SHALRRGSYALMCHAVLHADNLEHALRRMLKFLRAVLDDIHGELR 119

Query: 117 RLEEGYGLILTVHGDHLPPTRQSAEASLACALALCNWLTGRTLHPVKVLFQGTEPLDLAP 176
              EG   ++ +H D       +          L  WL  R +  +++ F+ + P D + 
Sbjct: 120 C--EGEHALIVLHDDGRTRRLFAYGTWFILVHGLACWLARRRIPLIEMRFRASAPTDDSD 177

Query: 177 YQRAFCAPLEFGASYDALIFERADMEAPLPTANEAMAQLHDRFAGEYLARF-SESRVTHK 235
           Y+  FC  + F A    + F+R+ ++  L     ++           L ++ +ES  T  
Sbjct: 178 YRMRFCEDVTFSAEETLIRFDRSFLDLKLSETEASLRAFLQNAPANILVKYRNESSTTAL 237

Query: 236 ARQILCRLLPQGEPKRDVVAQTLHLSQRTLQRRLQEEGTSFQSLLEDTRRELAEQYLAQP 295
            R+ L   +P   P  D +++ ++LS  TLQRRL  EGT+++ L ++ RR++A +  +  
Sbjct: 238 VRRRLRNQIPDDWPDLDELSRLMNLSAATLQRRLLAEGTNYRQLKDELRRDIAIELFSNS 297

Query: 296 GMTLLEIAYLLGFADPSNFFRAFRRWFDTTPGEYR 330
            +T+ E+A   GF + S F RAFR+W   +PG YR
Sbjct: 298 TLTVAEVAARTGFQETSAFHRAFRKWTGASPGMYR 332