Pairwise Alignments

Query, 520 a.a., Phenylalanine hydroxylase transcriptional activator PhhR from Pseudomonas fluorescens FW300-N2E2

Subject, 471 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas fluorescens FW300-N1B4

 Score =  221 bits (564), Expect = 3e-62
 Identities = 159/430 (36%), Positives = 222/430 (51%), Gaps = 45/430 (10%)

Query: 129 RYAEDFDLPELV----RANQSRING--LRVKVK-GDVFLADIAPLQSE---------HDD 172
           RYA  F L        RA +S I G  LR  V+ G   L D+     E         HDD
Sbjct: 47  RYARRFGLESAAGAIGRACESVIPGSLLREVVRTGRPILLDMQDTPKEPLVVMRLPIHDD 106

Query: 173 SEAMAGAV------------LTLHRADRVGERIYNVR-----KQELRGFDSIFQSSKVMA 215
           + A+ GA+              L R   + E + + R     +Q    F     +S    
Sbjct: 107 AGAVIGAIGFALFDELRSLSPMLKRYLSMQEELASTRSLLRARQTKYNFAHFIGTSTASL 166

Query: 216 AVVREARRMAPLDAPLLIEGETGTGKELLARACHLASPRGQSPLMALNCAGLPESMAETE 275
            V R ARR A  ++P+L+ GETGTGKELLA+A H ASPR     +++N A +PES+ E E
Sbjct: 167 EVKRRARRSASAESPVLLLGETGTGKELLAQAIHGASPRAHKAFVSINSAAIPESLLEAE 226

Query: 276 LFGYGPGAFEGARAEGKLGLLELTAGGTLFLDGVGEMSPRLQVKLLRFLQDGCFRRVGSD 335
            FG  PGAF GA  +G+ G L++  GGTLFLD +G+M   LQ KLLR LQ+  F  VGS+
Sbjct: 227 FFGTAPGAFTGADRKGRTGKLQIAQGGTLFLDEIGDMPLPLQSKLLRVLQEKEFEPVGSN 286

Query: 336 EEVYLDVRVICATQVDLSELCARGEFRQDLYHRLNVLSLHIPPLRECLDGLAPLVEHFLD 395
           E +  DVRVI AT  DL     RGEFR DLY+RLNVL + +PPLR+ LD L  L E  L+
Sbjct: 287 EVIQSDVRVIAATSTDLEAAIKRGEFRADLYYRLNVLPIQVPPLRDRLDDLPALSEAILE 346

Query: 396 QASRQIGCPLPKLAPAAMERLSRYHWPGNVRQLENVLFQAVSLCDGGTVKAEHIR--LPD 453
           +   Q      +L P A++ LS++ WPGN+R+L NVL +A  L D   +    IR  +  
Sbjct: 347 ELRSQ-----HELNPEALDLLSQHAWPGNIRELRNVLERAALLSDDLMLNVGDIRAAIGS 401

Query: 454 YGVRQPLGDFSLEGGLDEIVG----RFEKAVLERLYSEHPSS-RQLGKRLGVSHTTIANK 508
           +   Q +   ++E    E       RF++ ++E   ++      +   RLG+  +T+  K
Sbjct: 402 FIPVQRVAPLAIEPVAHETFSEARERFDRQLIETALAQCGGKVIEAAARLGLGRSTLYKK 461

Query: 509 LREYEVGKDP 518
           +    + + P
Sbjct: 462 MVALGIAESP 471