Pairwise Alignments

Query, 245 a.a., Flagellar basal-body rod protein FlgF from Pseudomonas fluorescens FW300-N2E2

Subject, 247 a.a., flagellar basal-body rod protein FlgF (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  249 bits (637), Expect = 3e-71
 Identities = 126/246 (51%), Positives = 164/246 (66%), Gaps = 1/246 (0%)

Query: 1   VDKYLYVAMTGASQNALAQRAHANNLANISTNGFQKDLEQARSMPVFGDSFPARAFAMSE 60
           +DK+LY++M+GA QN       ANNLAN +T+GF+ D+ QARSM  FG+  P R FAM E
Sbjct: 1   MDKFLYISMSGAKQNMNELALRANNLANANTDGFKSDMAQARSMQAFGEGLPTRVFAMVE 60

Query: 61  RPATDFTPGALVETGRDLDVAVSGPGWMAVQNPDGGESYVRTGSLNVDALGVLRAGNGMP 120
            P+ +F  G +  TGRDLDVA+ G GW AVQ  DG E+Y R+GSL+ D+ G+L    G P
Sbjct: 61  TPSANFRSGPIKSTGRDLDVAIKGDGWFAVQAQDGSEAYTRSGSLSFDSTGLLHNDRGNP 120

Query: 121 VMGNGGPIAVP-PEQKIEIGQDGTISIRAMGEGPRVMAEVDRIKLVNPDLKNMTKGLDGS 179
           VMG+ GPI +P P +K+ I QDG IS+R  G    V+ EV R+KLVNP    M +G DG 
Sbjct: 121 VMGDAGPIVLPLPIEKVTISQDGIISVRPQGATTEVVEEVGRLKLVNPGNAQMMRGEDGL 180

Query: 180 IRTKDGQPAPIDANVQLVSGFQEASNVNAVDEMTSVLALAKQFELHVKMMNTAKEGDEAM 239
            R   G PAP D +V + SG  E SNVN+VDEM S++ L +QFEL VKMM TA+E D A 
Sbjct: 181 FRLVSGDPAPADPSVSVESGAVEGSNVNSVDEMVSLIDLQRQFELQVKMMKTAEENDRAS 240

Query: 240 ARVLQI 245
           + +++I
Sbjct: 241 SSLMRI 246