Pairwise Alignments

Query, 231 a.a., Flagellar L-ring protein FlgH from Pseudomonas fluorescens FW300-N2E2

Subject, 234 a.a., flagellar basal body L-ring protein (RefSeq) from Shewanella loihica PV-4

 Score =  197 bits (501), Expect = 1e-55
 Identities = 109/232 (46%), Positives = 146/232 (62%), Gaps = 12/232 (5%)

Query: 2   KRFVSVLALSGITALAGCVAPTPRP--NDPYYAPVLPRTPLPAAANNGSIYQAGFEQNLY 59
           K  V V+AL    AL GC +   +P  +DPYYAPV P  P    A  GS+YQ     +LY
Sbjct: 13  KSSVLVVAL----ALVGCASTNQKPIADDPYYAPVYPEAPPTKIAATGSMYQDSQASSLY 68

Query: 60  SDRKAFRVGDIITITLNERTQASKNANSQIDKTSETSVGLTSLFGSSLTTNNPIGSNDLS 119
           SD KA +VGDIIT+ L E T+A K+AN+++ K S+ ++      G ++T    I  + + 
Sbjct: 69  SDIKALKVGDIITVILQESTKAKKSANNELKKGSDLTLDPIYAGGGNVT----ISGSPID 124

Query: 120 LNAGYSADRATKGDSQSGQSNSLTGSITVTVADVLPNGIIAVRGEKWLTLNTGDELVRIA 179
           L   Y     TK +S + QSNSL+GSI+  V  VL NG + +RGEKW+T+N GDE VR+ 
Sbjct: 125 LR--YKDSMNTKRESDADQSNSLSGSISANVMQVLNNGNLVIRGEKWITINNGDEFVRLT 182

Query: 180 GMVRADDISTDNTVPSTRVADARITYSGTGAFADASQPGWFDRFFLSPKFPF 231
           G+VR+ DI  DNT+ S RVA+ARI YSGTG FADA + GW  +FF+S  +PF
Sbjct: 183 GIVRSQDIRPDNTIDSQRVANARIQYSGTGTFADAQKVGWLSQFFMSDWWPF 234