Pairwise Alignments

Query, 434 a.a., Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 341 a.a., peptidoglycan hydrolase (RefSeq) from Shewanella loihica PV-4

 Score =  155 bits (391), Expect = 2e-42
 Identities = 82/202 (40%), Positives = 116/202 (57%), Gaps = 6/202 (2%)

Query: 220 DRAIAAVKPATGELANGDWLAALKAAEPKGDMQVYGRAV-AQPPLAPARKAFRDADEFVN 278
           DR   A   A  ++++GD     K      D  V G+ + +Q P   A K F   + FV 
Sbjct: 128 DRQSLAQSEAQSKVSSGD-----KPLPRIFDELVSGKVLPSQAPTGLANKGFESREAFVK 182

Query: 279 AMLPMAKEAADRIGVDPRYLVAQAALETGWGKSVMRQPDGSSSHNLFGIKASANWKGDSA 338
           A+ P A++AA  +G  P  L+AQ+ALETGWG+ ++R+ DG  S+NLF IKA   W G+ A
Sbjct: 183 AVYPHAEQAAKVLGTSPEVLIAQSALETGWGQKMVRRADGQPSNNLFNIKADRRWDGERA 242

Query: 339 RAITSEFRNGAMVKETAEFRSYASYRDSFHDLVNLLQSNSRYQDVLKSADKPEQFVRELQ 398
              T EF +G  VK+ A+FR Y   + SF D V+ +    RYQD +  A  P  F+R LQ
Sbjct: 243 GVSTLEFEHGVAVKQRADFRVYQDIKQSFDDFVSFISEGERYQDAMDKAANPAAFIRGLQ 302

Query: 399 KAGYATDPNYANKISNIARQMT 420
            AGYATDP+YA+K+  + + +T
Sbjct: 303 DAGYATDPDYADKVIKVMQAVT 324



 Score = 74.3 bits (181), Expect = 5e-18
 Identities = 36/96 (37%), Positives = 67/96 (69%), Gaps = 2/96 (2%)

Query: 13  DSASYSDLNRLNQLKV-GDKNSDGNLRKVAQEFESLFIGEMLKSMRSATEVLGKDNPMNT 71
           +++ + D+  L+ L+    K+    L++VAQ+FE +F+  ++KSMR A  V   D+PMN+
Sbjct: 6   NASHFLDIGGLDSLRAKAQKDDKAALKEVAQQFEGIFVQMLMKSMRDANAVFESDSPMNS 65

Query: 72  PEAKQYQEMYDQQLAVSMSREGGGIGLADVLLRQMS 107
              K Y++M+DQQ++V++S + G +GLAD++++Q+S
Sbjct: 66  QYTKFYEQMHDQQMSVNLS-DKGMLGLADLMVQQLS 100