Pairwise Alignments

Query, 283 a.a., Flagellin protein FlaA from Pseudomonas fluorescens FW300-N2E2

Subject, 295 a.a., flagellin domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  193 bits (491), Expect = 3e-54
 Identities = 117/294 (39%), Positives = 168/294 (57%), Gaps = 13/294 (4%)

Query: 1   MALTVNTNVTSLNVQKNLNRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRMTSQIRG 60
           M+L VN N T+L     LN   + L  S  RLSSGL+INSA DDAAGL I   M S I  
Sbjct: 1   MSLVVNNNFTALTTANTLNATYNKLEKSTQRLSSGLRINSAADDAAGLAIRELMRSDITA 60

Query: 61  QTVAIKNANDGISIAQTAEGALQESTNILQRMRELAVQARNDSNGTADREALNKEFAQMS 120
               ++NAND IS+ QTA+GA++     L RM+ELA QA   +  +  R  ++ E+  M+
Sbjct: 61  LNQGVRNANDAISLIQTADGAMETIDEKLIRMKELAEQAATGTYNSDQRLIIDSEYQAMA 120

Query: 121 DELTRIAESTNLNGKNLIDGSAGTMTFQVGSNTGATNQITLTLDSGFDAA---------T 171
            E+TRIA +T+ NG  L++G+    T+  GS   +T Q+ +   SG D+A         +
Sbjct: 121 SEITRIANATDFNGIALLNGNLSNSTYD-GSGLTSTGQLHIHFGSGNDSAQDYYEIRIGS 179

Query: 172 LSVDSAAIAITGS---DSTTAEASTSAAIVAIDAALATINSSRADLGAAQNRLTSTISNL 228
           +S  S  +  T S    S + + +   A+ AID A+ + +  RA LGA QNRL +TI+NL
Sbjct: 180 VSAKSLGLGNTASGNGSSISTQQAAQDALDAIDNAIISKDQIRASLGAMQNRLEATITNL 239

Query: 229 QNVNENAAAALGRVQDTDFAAETAQLTKQQTLQQASTSVLAQANQLPSAVLKLL 282
           +  +EN +AA  R+ D D + E  + TKQQ L Q + ++L+QAN LP   L L+
Sbjct: 240 ETQSENLSAAESRISDVDVSLEMTEYTKQQVLAQTAVAMLSQANSLPQMALSLI 293