Pairwise Alignments

Query, 283 a.a., Flagellin protein FlaA from Pseudomonas fluorescens FW300-N2E2

Subject, 295 a.a., flagellin domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  174 bits (440), Expect = 3e-48
 Identities = 109/295 (36%), Positives = 163/295 (55%), Gaps = 15/295 (5%)

Query: 1   MALTVNTNVTSLNVQKNLNRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRMTSQIRG 60
           M+L +N N+ ++N   NL+ +   L+TS+ RLSSGL++ +A DDAAGL I   M + I  
Sbjct: 1   MSLVINHNLMAMNATNNLSLSYGKLATSVRRLSSGLRVGTAADDAAGLAIRELMRADIAS 60

Query: 61  QTVAIKNANDGISIAQTAEGALQESTNILQRMRELAVQARNDSNGTADREALNKEFAQMS 120
                +NAND IS+ QTA+GAL      L RM+ELA QA   +  +  R  ++ E+  M+
Sbjct: 61  LNQGARNANDAISLIQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMA 120

Query: 121 DELTRIAESTNLNGKNLIDGSAGTMTFQVGSNTGATNQITLTLDSGFDAAT----LSVDS 176
            E+TRIA ST+ NG +L++G         GS   AT ++ +   S  D A     + + +
Sbjct: 121 SEITRIANSTDFNGVHLLNGHLSGA--HDGSGIEATGKLKVHFGSANDCAEDYYYIKIGN 178

Query: 177 AAIAITG---------SDSTTAEASTSAAIVAIDAALATINSSRADLGAAQNRLTSTISN 227
           A  +  G           S + +++  AA+  +  A+ + +  RA LGA QNRL +TISN
Sbjct: 179 ATASALGVGAQAADGKGKSISTQSAAQAALEGLTNAIISKDKIRASLGALQNRLENTISN 238

Query: 228 LQNVNENAAAALGRVQDTDFAAETAQLTKQQTLQQASTSVLAQANQLPSAVLKLL 282
           LQ   EN  AA  R+ D D + E  +  +QQ L Q++ ++L+QAN LP   L LL
Sbjct: 239 LQIQAENLQAAESRISDVDVSMEMTEFVRQQILSQSAVAMLSQANSLPRLALNLL 293