Pairwise Alignments

Query, 477 a.a., Flagellar hook-associated protein FliD from Pseudomonas fluorescens FW300-N2E2

Subject, 685 a.a., flagellar hook protein FliD from Ralstonia solanacearum GMI1000

 Score =  160 bits (406), Expect = 1e-43
 Identities = 136/401 (33%), Positives = 218/401 (54%), Gaps = 49/401 (12%)

Query: 10  GLGSGLDTTAIVKALVDSDKAAKQGQIDRATKTN-TANISGIGTLKSLLATFQSALESLG 68
           G+G+ +D + +V  L+  +  ++   + ++T+T+  A +S +GTLKS L+TFQSAL SL 
Sbjct: 23  GIGTSIDVSTLVTKLMSVE--SQPLTLLQSTQTSYQAQLSAVGTLKSSLSTFQSALSSLT 80

Query: 69  STTSPQFTGVAATSANTSALTVTAGNSAVSGTYSVNVTQLATSSKVA-------TAAFAG 121
           S +   FT + A+  +TS L+ +  +SA SGTY+VNVTQLA S  +A       TAA   
Sbjct: 81  SLSG--FTSMKASGYDTSILSASVTSSAPSGTYAVNVTQLAQSQVLAAQGQTSTTAAIGS 138

Query: 122 GASS-------AVEAGTL--------TISQSGK----DYTLDIPADATLQSVRDAINSKY 162
           GAS+        V  GTL        T +Q+G       T++  ++ TL  +RDAINS  
Sbjct: 139 GASTTISFQFGTVSGGTLSNGKYTGATFTQNGNLTGGSITIN-SSNNTLAGIRDAINS-- 195

Query: 163 SSSGLTANIVTDNFG--SRLVVGSTKTGAGSD--ISLSGIASLAANGSVEMGTPSATSSG 218
           ++ G++A+IV D     +RLV+ ST  G+ S+  IS+SG ++LA   S+    P+ T + 
Sbjct: 196 ANLGVSASIVNDGSSTPNRLVLTSTAGGSSSEMKISVSGDSTLA---SLLSNDPAGTQNM 252

Query: 219 S-IGLAKDAVFTVDGLSMTSPTNKLDNVISGLNMTLLVAGSGPTTVTVATNADGLKASIQ 277
           S +   ++A+ TV+G+++ SPTN L NV+ G ++TL   GS  T V+VA ++      + 
Sbjct: 253 SEVTTGQNALATVNGIAVQSPTNTLSNVVDGTSLTLSKIGS--TMVSVANDSTSTTTGVV 310

Query: 278 KFVDAYNAIAKAVTSLTKPSTDANGNSVPAALTGDSLPRSLLAAIRAPLSETGAGDKLTV 337
            FV AYNA+  ++ SLT   T  + N+   AL  D   ++L+  I   L +         
Sbjct: 311 NFVKAYNALRISLNSLTNIDTSNSANN--GALASDVSTKTLINQITDVLGQAIGSGTYQS 368

Query: 338 LSQLGITTNQTTGALDFNSAKFTEALNTKQLGGEVQTLFTG 378
           +  +G+T   + G L  +  K + A+       +V +LF G
Sbjct: 369 MGSIGVTMG-SDGTLSIDDTKLSAAIAASP--SQVASLFAG 406



 Score = 64.7 bits (156), Expect = 1e-14
 Identities = 79/325 (24%), Positives = 141/325 (43%), Gaps = 29/325 (8%)

Query: 11  LGSGLDTTAIVKALVDSDKAAKQGQIDRATKTNTANISGIGTLKSLLATFQSALESLGST 70
           L S + T  ++  + D    A      ++  +    +   GTL        +A+ +  S 
Sbjct: 340 LASDVSTKTLINQITDVLGQAIGSGTYQSMGSIGVTMGSDGTLSIDDTKLSAAIAASPSQ 399

Query: 71  TSPQFTGVAATSANTSALTVTAGNSAVSGTYSVNVTQLATSSKVATAAFAGGASSAVEAG 130
            +  F G A T+ +      +  +S  +GTY+VNVTQLAT   +  +A A    +     
Sbjct: 400 VASLFAG-AGTATDALVSVPSFSDSTQAGTYAVNVTQLATQGSLKGSAAANTTITQGAND 458

Query: 131 TLTISQSGKDYTLDIPADA-TLQSVRDAINSKYSSS------GLTANIVTDNFGSRLVVG 183
           TL I+ S     + +PA + T  S+   I S+ ++S      G+TA++  D+ G  L   
Sbjct: 459 TLAITVSNITTNITVPAGSYTASSLAAQIQSQLNASTGLQNAGITASVAADSSGV-LTFT 517

Query: 184 STKTGAGSDISLSGIASLAANGSVEMGTPSATSSGSIGLAKDAVFTVDGLSMTSPTNKL- 242
           S++ G+ S++S+SG      NG+  +   S TS       +D   T++G++ T     L 
Sbjct: 518 SSQYGSTSNVSISG------NGASSLVGSSPTSV----TGQDVQGTINGVAATGAGQNLY 567

Query: 243 ---DNVISGLNMTLLVAGSGPTTVTVATNADGLKASIQKFVDAYNAIAKAVTSLTKPSTD 299
                 + GL  T+ VAG    +    T   G  A +   + +      + T + +  TD
Sbjct: 568 GATGTAVDGL--TVKVAGGAVGSRGTVTVQRGYAAQLNTVMTS----LLSSTGMVQNETD 621

Query: 300 ANGNSVPAALTGDSLPRSLLAAIRA 324
           +  NS+ +  +  S  ++ L+A  A
Sbjct: 622 SINNSLTSLASRISTMQTQLSAKEA 646