Pairwise Alignments

Query, 477 a.a., Flagellar hook-associated protein FliD from Pseudomonas fluorescens FW300-N2E2

Subject, 456 a.a., flagellar hook-associated protein FliD (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  208 bits (530), Expect = 3e-58
 Identities = 147/473 (31%), Positives = 249/473 (52%), Gaps = 28/473 (5%)

Query: 10  GLGSGLDTTAIVKALVDSDKAAKQGQIDRATKTNTANISGIGTLKSLLATFQSALESLGS 69
           G+GSGLD + IVK LVD++KA K+   ++   +  A +S +GTLKS L+TFQ A++ L  
Sbjct: 7   GMGSGLDISNIVKVLVDAEKAPKEAMFNKTEDSIKAKVSAMGTLKSALSTFQDAVKKL-- 64

Query: 70  TTSPQFTGVAATSANTSALTVTAGNSAVSGTYSVNVTQLATSSKVATAAFAGGASSAVEA 129
            T         + +  + L+  A  +A +G+Y + V Q+AT+ K+A    A  A+  V  
Sbjct: 65  QTGDALNQRKISVSTDAYLSAKAEKTAQAGSYGIKVEQVATNHKIAGTNVA-DATQPVGE 123

Query: 130 GTLTISQSGKDYTLDIPADATLQSVRDAINSKYSSSGLTANIVTDNFGSRLVVGSTKTGA 189
           G+L    +GK +++DI A  +L  +   +N    + G+TA ++T + GSRLV  + KTG 
Sbjct: 124 GSLAFGVNGKSFSVDIAATDSLAEIAKKVNEASDNVGVTATVITSDAGSRLVFSANKTGE 183

Query: 190 GSDISLSGIASLAANGSVEMGTPSATSSGSIGLAKDAVFTVDGLSMTSPTNKLDNVISGL 249
            + ISL+   + + +G  +M     TS  ++  AK+AV  +DG  +TS +N++ N I+G+
Sbjct: 184 DNQISLTA-TNTSGSGVTDMFGSGNTS--TLQDAKNAVLYIDGQKVTSQSNEVKNAITGV 240

Query: 250 NMTLLVAG-SGPTTVTVATNADGLKASIQKFVDAYNAIAKAVTSLTKPSTDANGNSVPAA 308
            + L  A  +  TTV +  + + +K ++Q FVDAYN++   VT++ K S+        AA
Sbjct: 241 TLNLTNADVAKTTTVKIEQDNEAVKTNVQAFVDAYNSL---VTTIDKMSSYDKDKKTAAA 297

Query: 309 LTGDSLPRSLLAAIRAPLS---ETGAGDKLTVLSQLGITTNQTTGALDFNSAKFTEALNT 365
           L GDS+ RS+ + +R+  S    T  G  +  L  +GI  ++  G L  +  K  +AL  
Sbjct: 298 LQGDSMIRSIESQLRSVASGRVPTADGGSI-ALYDIGIKADR-YGKLSVDDTKLNKALTE 355

Query: 366 KQLGGEVQTLF-TGENGLIERMQNALKPYTETGKKDSNGKPVDNILTARSKNLEILKAKL 424
                 V+ LF T + GL  R  +    Y ++            ++  R  +    +++L
Sbjct: 356 DM--SSVEALFATPDKGLANRFNDLANSYVKS----------SGLIADRQSSYTTQQSRL 403

Query: 425 GEDQLALDRRIETLTAVLTKKYNDMDTLVGRLKATASNITSMFEALTAQQKNS 477
            + + A   +++ LTA LTK++N MD +VG+L   +S +     +L    K S
Sbjct: 404 ADQRAAFTLKMDQLTARLTKQFNAMDLVVGKLNQQSSGLVDRLNSLPGAVKKS 456