Pairwise Alignments

Query, 491 a.a., Flagellar regulatory protein FleQ from Pseudomonas fluorescens FW300-N2E2

Subject, 459 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  273 bits (698), Expect = 9e-78
 Identities = 182/483 (37%), Positives = 270/483 (55%), Gaps = 34/483 (7%)

Query: 7   ILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQAVGSLSSSREVICVLIGTVNAPATL 66
           +L+IDD+   R  +  ++  +G   +  GS +     G      E + V++  +  P   
Sbjct: 4   LLVIDDEPGHRLMVRAVMEDVGWHVVEAGSGE----EGLELLVHEQVHVVLLDMRMPG-- 57

Query: 67  LGLLKTLSTWDEFLP----VLLMGENSSLDLPEDQRRRVLSTLEMPPSYSKLLDSLHRAQ 122
           +   +TL+   E  P    V+L    +     E  +      L  P    +L+  L +A 
Sbjct: 58  MDGQETLARILEIQPGLPVVMLTAYGTVGSAVEAMKCGAFDYLTKPADNEELVAVLEKAW 117

Query: 123 VYREMYDQARE-RGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGKE 181
            +R +  +  E R R+ E +    LVG S+ +  +R  ++Q   ++A+VLI+GESGTGKE
Sbjct: 118 EHRRLVVENEELRKRYVENDPTAPLVGASQVMHRMRDFIRQAGPSEATVLIMGESGTGKE 177

Query: 182 VVARNLHYHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGGT 241
           ++A+ LH  S R   P V VNC A+P  LLESELFG+ +GAFTGA+  + GRF+LA GGT
Sbjct: 178 LIAQALHDASTRARQPLVKVNCAALPGHLLESELFGYVRGAFTGAVKDKPGRFQLARGGT 237

Query: 242 LFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEVGSFRE 301
           LFLDEIG++PL +Q KLLRVLQER  E +G  +  SVDVRIIAAT+++L   +  G+FRE
Sbjct: 238 LFLDEIGELPLELQAKLLRVLQERVVEPLGGVRPVSVDVRIIAATNRDLRREVAKGTFRE 297

Query: 302 DLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIM-SLCRHGWPG 360
           DLY+RLNV  +   PLR+R+ED+P L+ EL+ ++  + R SIR  SA    +L RH WPG
Sbjct: 298 DLYFRLNVLEVVSPPLRKRMEDLPQLVEELLGKLCRKNRKSIRCISADFFEALSRHSWPG 357

Query: 361 NVRELANLVERMAIMHPYGVIGVNELPKKFRYVDDEDEQMVDSLRSDLEERVAINGHTPD 420
           NVREL N++ER  I+     +  + LP +       DE  V  ++   +ER  ++  +  
Sbjct: 358 NVRELENVLERALILSRTDSLSADALPPQL----FGDEPQVADMQ---QERPVVDDDS-- 408

Query: 421 FTANALLPPEGLDLKDYLGGLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM 480
                   P  LD        E+G + +ALD   G   + A+ L I R TL  K++K+G+
Sbjct: 409 -------RPCSLD------EAEKGELLRALDVHGGHREKTADALGISRRTLQYKLKKFGL 455

Query: 481 SRR 483
           +RR
Sbjct: 456 TRR 458