Pairwise Alignments

Query, 322 a.a., Flagellar motor switch protein FliM from Pseudomonas fluorescens FW300-N2E2

Subject, 326 a.a., flagellar motor switch protein FliM (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  244 bits (624), Expect = 2e-69
 Identities = 121/321 (37%), Positives = 201/321 (62%), Gaps = 4/321 (1%)

Query: 6   LLSQDEIDALLHGVDDGLVQTENAAE--PGSVKSYDLTSQDRIVRGRMPTLEMINERFAR 63
           +L+QDE+DALL G+  G +++E   +     +  +DL +QDRI+RGRMP LE++N+RFAR
Sbjct: 4   ILAQDEVDALLRGLSGGEIESETDIQHDDSGIVPFDLANQDRIIRGRMPVLEIVNDRFAR 63

Query: 64  YTRISMFNMLRRSADVAVGGVQVMKFGEYVHSLYVPTSLNLVKIKPLRGTALFILDAKLV 123
               ++ N +R+  ++    + + KFG+++ SL VPTS+N+ K++PLRG A+ ++D++LV
Sbjct: 64  LCTNALSNAVRKRVELNPISIDMTKFGDFMRSLPVPTSINIFKMEPLRGNAIIVVDSRLV 123

Query: 124 FKLVDNFFGGDGRHAKIEGREFTPTELRVVRMVLEQAFVDLKEAWQAIMEVNFEYINSEV 183
           F LV+NFFGG G   KIEGREFT  E  +V  V+  A  +++E+W+ + +V+ E + SE+
Sbjct: 124 FALVENFFGGSGSQPKIEGREFTRIEQAIVDRVIHIALDNMEESWRPVHDVHLELVRSEI 183

Query: 184 NPAMANIVGPSEAIVVSTFHIELDGGGGDLHVTMPYSMIEPVREMLDAGFQSDLDDQDER 243
           NP  A IV PS+ +VV TF +ELD   G + + +PY+ IEP+R  L A FQ++  + D  
Sbjct: 184 NPQFAAIVPPSDVVVVITFEVELDSAIGSMVICLPYATIEPIRSKLHASFQTERLEVDHA 243

Query: 244 WINALRQDVLDVDVPIGATVARRQLRLRDILHMQPGDIIPVEMPEDMIMRAN--GVPAFK 301
           W+  L++ +++  V +       ++    +L +Q GD++ ++   D ++     GV  F 
Sbjct: 244 WVARLKERLMETPVELKVRFGETKITGNQLLRLQVGDVLLLDTDTDDMLEVTIAGVTKFW 303

Query: 302 VKMGSHKGNLALQVIEPIERR 322
              G+ K N A Q+++  E R
Sbjct: 304 GLGGTVKANKAFQIVKEEEPR 324