Pairwise Alignments

Query, 249 a.a., Flagellar biosynthesis protein FliP from Pseudomonas fluorescens FW300-N2E2

Subject, 216 a.a., type III secretion system protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  152 bits (383), Expect = 7e-42
 Identities = 79/195 (40%), Positives = 125/195 (64%), Gaps = 7/195 (3%)

Query: 51  MTALSFIPAFVMLMTSFTRIIIVFSILRQALGLQQTPSNQILTGMALFLTMFIMAPVFDR 110
           M  L   P F+M++TS+ +I++V S++R ALG+QQ P   ++ G+A+ L++FIMAP+ + 
Sbjct: 13  MALLGLAPFFLMMVTSYVKIVVVTSLVRNALGVQQVPPAMVMNGLAIILSIFIMAPMVES 72

Query: 111 VNQDALQPYLAEKITAQDAVA---KAEVPIKDFMLAQTRSSDLELFMRLSKRT----DIP 163
                    ++E+   ++ V    +A  P++DF+        +  FM  +KR        
Sbjct: 73  TLDILKTVRVSEQPEPREVVELLDRASPPLRDFLSRNADDKVITAFMGTAKRIWPKERHD 132

Query: 164 SADQAPLTILVPAFVTSELKTAFQIGFMIFIPFLIIDLVVASILMAMGMMMLSPLIISLP 223
           +  +  L ILVPAF  SEL  AFQIGF++++PF+ IDL++++IL+AMGMMM+SP+ ISLP
Sbjct: 133 TIRRENLLILVPAFTISELTKAFQIGFLLYLPFVAIDLIISNILLAMGMMMVSPMTISLP 192

Query: 224 FKIMLFVLVDGWALI 238
           FK++LFV +DGW  I
Sbjct: 193 FKLLLFVTLDGWLKI 207