Pairwise Alignments

Query, 249 a.a., Flagellar biosynthesis protein FliP from Pseudomonas fluorescens FW300-N2E2

Subject, 216 a.a., type III secretion system protein, YscR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  150 bits (380), Expect = 2e-41
 Identities = 81/194 (41%), Positives = 123/194 (63%), Gaps = 11/194 (5%)

Query: 51  MTALSFIPAFVMLMTSFTRIIIVFSILRQALGLQQTPSNQILTGMALFLTMFIMAPVFDR 110
           M  L   P F+M++TS+ +I++V S++R ALG+QQ P   ++ G+A+ L++FIMAPV   
Sbjct: 13  MALLGLAPFFLMMVTSYVKIVVVTSLVRNALGVQQVPPTMVMNGLAIILSIFIMAPVASG 72

Query: 111 VNQDALQPYLAEKITAQDAVA---KAEVPIKDFMLAQTRSSDLELFMRLSKRTDIPSADQ 167
                    +      ++ +A   KA  P++ F+        + +FM  +KR  I  ADQ
Sbjct: 73  TLDLMQNMKIGPDPAPREIIALLDKASPPLRGFLERNADDKVVTVFMSTAKR--IWPADQ 130

Query: 168 AP------LTILVPAFVTSELKTAFQIGFMIFIPFLIIDLVVASILMAMGMMMLSPLIIS 221
                   L IL+P+F  SEL  AFQIGF++++PF+ IDLV+++IL+AMGMMM+SP+ IS
Sbjct: 131 HASISRDNLLILIPSFTISELTRAFQIGFLLYLPFVAIDLVISNILLAMGMMMVSPMTIS 190

Query: 222 LPFKIMLFVLVDGW 235
           LPFK++LFV +DGW
Sbjct: 191 LPFKLLLFVTLDGW 204