Pairwise Alignments

Query, 710 a.a., Flagellar biosynthesis protein FlhA from Pseudomonas fluorescens FW300-N2E2

Subject, 699 a.a., flagellar biosynthesis protein FlhA (RefSeq) from Shewanella loihica PV-4

 Score =  832 bits (2149), Expect = 0.0
 Identities = 423/685 (61%), Positives = 536/685 (78%), Gaps = 7/685 (1%)

Query: 23  LGVPLLLLVMLAMMMLPVPPFLLDVFFTFNIALSIVVLLVCVYALRPLDFAVFPTILLVA 82
           +G P+L+L  LAM++LP+P FLLD+ F+FNIAL++VVLLV +Y  RPLDFA FPT+LLVA
Sbjct: 21  IGTPILVLAALAMIVLPMPAFLLDILFSFNIALALVVLLVAIYTDRPLDFAAFPTVLLVA 80

Query: 83  TLLRLALNVASTRVVMLHGQDGHAAAGKVIQAFGEVVIGGNYVVGIVVFAILMIINFVVV 142
           TLLRLALNVASTR+V+L G +G  AAGKVI+AFG VVIGGNY VG+VVF IL+IINF VV
Sbjct: 81  TLLRLALNVASTRIVLLEGHNGGDAAGKVIEAFGSVVIGGNYAVGLVVFLILIIINFAVV 140

Query: 143 TKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQGQAKLRRLEVAQEAEFYGSMDGA 202
           TKGAGRISEVSARFTLDAMPGKQMAIDADLNAG+++Q QA++RR EV +EA+FYG+MDGA
Sbjct: 141 TKGAGRISEVSARFTLDAMPGKQMAIDADLNAGILNQDQARIRRAEVTKEADFYGAMDGA 200

Query: 203 SKFVRGDAIAGLLILFINLIGGMAVGIFQHNMTFGDAGKVYALLTIGDGLVAQLPSLLLS 262
           SKFV+GDAIAG++IL IN++GG  +G+ QH + F  A ++Y LLTIGDGLVAQ+P LLLS
Sbjct: 201 SKFVKGDAIAGIMILVINILGGFVIGMAQHGLDFSSAVEIYTLLTIGDGLVAQIPGLLLS 260

Query: 263 TAAAIMVTRASGSEDMGKQIGRQMFASPKALAVAAGLMAVMGLVPGMPHISFLTMAAAAA 322
            AAA+MVTR + S DMG+ +  QMF +PK+LA+AAG++  MG+VPGMPH +FL+     A
Sbjct: 261 IAAALMVTRQNESGDMGQMVMSQMFDNPKSLAIAAGVLLTMGIVPGMPHFAFLSFGLITA 320

Query: 323 GGAYLFWKKQNAQKVQALQEVKRQQELLPSPARAMETKELGWDDVTPIDMIGLEVGYRLI 382
           GGAY   +K++  + +AL E+ +     P  A+    KEL WDDV  +D IGLEVGYRLI
Sbjct: 321 GGAYFLHRKKDLDRQRAL-EIAKSSPATPGDAK---PKELSWDDVQQVDTIGLEVGYRLI 376

Query: 383 PLVDRNQGGQLLARIKGVRKKLSQDLGFLMPTVHIRDNLDLAPSAYRLTLMGVILAEAEI 442
           PLVD+ QGG+LL RIKGVRKKLSQ+LGFL+P VHIRDNLDLAP+ YR++LMGV   EA+I
Sbjct: 377 PLVDKGQGGELLGRIKGVRKKLSQELGFLVPAVHIRDNLDLAPNTYRISLMGVASGEADI 436

Query: 443 YPDRELAINPGQVYGSLNGITAKDPAFGLEAVWIEISQRAQAQSLGYTVVDASTVVATHL 502
             D ELAINPGQVYG L+G+   DPAFGLEAVWI    R  AQ+LGYTVVDA+TVVATHL
Sbjct: 437 RHDCELAINPGQVYGKLDGVETTDPAFGLEAVWIAPELREHAQTLGYTVVDAATVVATHL 496

Query: 503 NQILYKHSSELIGHEEVQQLLQVLAKGSPKLAEELVPGVVSLSQLLKVLQALLAEQVPVR 562
           +Q+L  ++S+L+G+EEVQQL+ +LAK SPKL    +P V+ L  ++KV+Q LL E V +R
Sbjct: 497 SQLLTNNASKLLGYEEVQQLMDMLAKHSPKLVSGFIPDVLPLGTVVKVMQNLLNEGVSIR 556

Query: 563 DIRSIAEAIANNASKSQDTAALVAAVRVGVSRAIVQSIVGTESELPVITLEPRLEQILLN 622
           D+++I + +     KS DT  L AAVR+ + R IVQ I G E E+PVITL P LEQ+L  
Sbjct: 557 DLKTIVQTLLEYGPKSNDTEVLTAAVRIALKRMIVQEISGPEPEIPVITLAPELEQMLHQ 616

Query: 623 SLQKAGQGSEEGVLLEPSMAEKLQRSLIEAAQRQEMQGQPVILLVAGPIRAMLSRFGRLA 682
           S+Q  G    EG  +EPS+AE++Q+SL++A+QRQEM GQP ILL +G +R+ LSRF +  
Sbjct: 617 SMQATG---GEGPNIEPSLAERMQKSLLDASQRQEMVGQPAILLTSGMLRSTLSRFVKHT 673

Query: 683 VPGLHVLAYQEIPDNKQVTIVATVG 707
           +P L V++YQE+PD KQ+ IV+ VG
Sbjct: 674 IPNLRVISYQEVPDEKQIRIVSAVG 698