Pairwise Alignments

Query, 710 a.a., Flagellar biosynthesis protein FlhA from Pseudomonas fluorescens FW300-N2E2

Subject, 703 a.a., flagellar biosynthetic protein FlhA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  548 bits (1411), Expect = e-160
 Identities = 299/684 (43%), Positives = 446/684 (65%), Gaps = 17/684 (2%)

Query: 29  LLVMLAMMMLPVPPFLLDVFFTFNIALSIVVLLVCVYALRPLDFAVFPTILLVATLLRLA 88
           ++ +L +M++P+P F LD+    +I+LS+V+L+  ++ + PL+F++FP++LLV TLLRLA
Sbjct: 28  VVTILFVMLVPLPTFFLDILLCCSISLSLVILVTSMFMMSPLEFSIFPSLLLVTTLLRLA 87

Query: 89  LNVASTRVVMLHGQDGHAAAGKVIQAFGEVVIGGNYVVGIVVFAILMIINFVVVTKGAGR 148
           LNVASTR+++LHG +G  AAG+VI+AFGE V+GG+YV+G V+F IL I+N  V+T G  R
Sbjct: 88  LNVASTRLILLHGDEGTDAAGEVIRAFGEFVVGGSYVIGAVIFMILFILNKNVITAGTTR 147

Query: 149 ISEVSARFTLDAMPGKQMAIDADLNAGLIDQGQAKLRRLEVAQEAEFYGSMDGASKFVRG 208
           I+EV+ARFTLDAMPGKQMAI+ADLNAGLID+ +A  RR  + +EA+FYG+MDGA KFV G
Sbjct: 148 IAEVAARFTLDAMPGKQMAIEADLNAGLIDETEANERRKNIRKEADFYGAMDGAGKFVSG 207

Query: 209 DAIAGLLILFINLIGGMAVGIFQHNMTFGDAGKVYALLTIGDGLVAQLPSLLLSTAAAIM 268
           D  AG+ I  IN+IGG+ VGI Q +M + DA   Y LLT+GDGLV+ +PS+++STAA I+
Sbjct: 208 DVNAGMFITLINIIGGLLVGIIQKDMPWRDALTTYTLLTVGDGLVSTIPSIIVSTAAGII 267

Query: 269 VTRASGSEDMGKQIGRQMFASPKALAVAAGLMAVMGLVPGMPHISFLTMAAAAAGGAYLF 328
           V+RA+    MG++   Q+  + +A+ + +G++ +  LVPG+P + FL  +A+    A L 
Sbjct: 268 VSRAASEAKMGEEFLGQLTYNSRAMRLVSGVLLLFALVPGLPTVPFLIFSASLFFFAKLL 327

Query: 329 WKK-----QNAQKVQALQEVKRQQELLPSPARAMETKELGWDDVTPIDMIGLEVGYRLIP 383
             +     Q   K    +  K + + L +P             + P+D + LEVGY LIP
Sbjct: 328 GDRDGDEAQGDAKRAGGKAAKGKGDSLDTPEEVQA--------LLPLDALELEVGYGLIP 379

Query: 384 LVDRNQGGQLLARIKGVRKKLSQDLGFLMPTVHIRDNLDLAPSAYRLTLMGVILAEAEIY 443
           LVD  Q G LL RI+ +R++ + D+G ++P++H+RDNL L P  Y L + G  +  AEI 
Sbjct: 380 LVDEEQNGNLLTRIRSIRRQFALDMGVVIPSLHLRDNLQLKPGQYALLIKGNQVTSAEIL 439

Query: 444 PDRELAINPGQVYGSLNGITAKDPAFGLEAVWIEISQRAQAQSLGYTVVDASTVVATHLN 503
            D  LA++PG     + GI  ++PAF L A+WI  SQ+ +A   GYTVVD STV+ATHL 
Sbjct: 440 IDHLLAMDPGTARHRIQGIETREPAFNLPALWIPESQKEEAMLAGYTVVDPSTVIATHLT 499

Query: 504 QILYKHSSELIGHEEVQQLLQVLAKGSPKLAEELVPGVVSLSQLLKVLQALLAEQVPVRD 563
           ++  +H SE +G +EVQ LL  L+K +PK  EELVPGV+SL  + KVLQ L+ E V VRD
Sbjct: 500 EVFRRHLSEFLGRQEVQGLLDNLSKHAPKAVEELVPGVLSLGVVQKVLQNLVRENVSVRD 559

Query: 564 IRSIAEAIANNASKSQDTAALVAAVRVGVSRAIVQSIVGTESELPVITLEPRLEQILLNS 623
           + S+ E +A+     ++   L   VR  ++R+IV+  + +E  LP+ITL+  +E+ L +S
Sbjct: 560 LLSVVETLADYGPAIKNPDTLTEYVRERLARSIVKPHMDSEGTLPIITLDANVERTLQDS 619

Query: 624 LQKAGQGSEEGVLLEPSMAEKLQRSL-IEAAQRQEMQGQPVILLVAGPIRAMLSRFGRLA 682
           +++   G+   + L PS A++L +S+  +        GQPV+L   G  R  L++     
Sbjct: 620 IRQTEGGAY--LALNPSTAQRLIQSVNTQVENAVGTDGQPVVLTQPG-TRPHLAQLLMRF 676

Query: 683 VPGLHVLAYQEIPDNKQVTIVATV 706
           +P + VL+  EIP + ++  V  V
Sbjct: 677 LPNIPVLSQAEIPPDIRLQAVGNV 700