Pairwise Alignments

Query, 111 a.a., Competence protein ComEA helix-hairpin-helix region precursor from Pseudomonas fluorescens FW300-N2E2

Subject, 121 a.a., DNA-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 58.5 bits (140), Expect = 3e-14
 Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 15/105 (14%)

Query: 20  AAIAAPVVKPEVVATPQAVEQPAKTQS--------------TKVDLNGADAATLQRELSG 65
           A +  P +  + V     V+  AKT++               +V++N A A  LQ  L G
Sbjct: 18  ALLTIPAIAADPVKEASKVQSQAKTEAKNMANDAKQALPDAAQVNINTASAEQLQL-LKG 76

Query: 66  IGKGKAEAIVAYRENNGPFSSVEELLEVKGIGKAILDRNRDKLEV 110
           IG  KA+AI+ YR  NG F +++EL  V GIG  ++++NR  +++
Sbjct: 77  IGVAKAQAIIDYRTQNGQFKAIDELANVSGIGAKLIEQNRHMIKL 121