Pairwise Alignments

Query, 345 a.a., UPF0028 protein YchK from Pseudomonas fluorescens FW300-N2E2

Subject, 315 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  167 bits (424), Expect = 3e-46
 Identities = 105/326 (32%), Positives = 166/326 (50%), Gaps = 38/326 (11%)

Query: 5   VALVLGSGGARGYAHIGVIEEIERRGYDIACIAGCSMGAVVGGIYAAGKLEEYRNWIESL 64
           + + LGSG A+G+AHIGV+  +   G     +AGCS+GA+VG  YA   L E   W+ S 
Sbjct: 9   IGIALGSGAAKGWAHIGVLNGLAAMGIKPDKVAGCSVGALVGAAYAHNHLAELEEWVRSF 68

Query: 65  DYLDVLRLVDVSFRLGA-IRGEKVFGQIRKIVGEINIEQLRIPYTAVATDLTNQQEIWFQ 123
              DVL L+D+ +R G  I GEKVF  ++  +G++NIE L  P+ A+ATDL + QEIWF+
Sbjct: 69  SSWDVLGLMDIRWRKGGLIGGEKVFDVLQSRIGDVNIEDLEYPFAAIATDLYSGQEIWFR 128

Query: 124 EGCLHQAMRASAAIPSLFTPVMQGNRMLVDGGLLNPLPIVPVVSSHCDLIIAVNLNATNQ 183
            G L QA+RAS ++P +  PV QG R LVDG ++NP+P+    +   D++IAV+L+  + 
Sbjct: 129 HGDLRQAVRASCSMPGILAPVRQGERWLVDGAVVNPVPVSVSRAMGVDIVIAVDLHGFHS 188

Query: 184 KQYRLPVIPRPAAFRRRFDTLVSSLGSRLPFRRKQAEQLLLLEQEALKAEAADINPWIDS 243
              RL V+P      R      +   + +P R++     L                    
Sbjct: 189 G--RLQVLPVNMTSHR-----ATKEDTEMPARQETGFMDLF------------------- 222

Query: 244 AEPEGQQPAAAPENEGAPKSATGSFIIDNVGPASLLDLINQSFEVMQTSLAQYKIAGYPP 303
               G++  +         + T  F +       ++ +++QS  +++    + ++ G PP
Sbjct: 223 --ARGREYVS---------NLTDKFSLGTKSNPGMIAVMSQSMGILEQRHKRARLMGDPP 271

Query: 304 DVLINVPKRVCRFFEFYKAPELIALG 329
           D+ I          EF++A E IA G
Sbjct: 272 DICIVPEVANIGTMEFHRADEAIAAG 297