Pairwise Alignments

Query, 323 a.a., ErfK/YbiS/YcfS/YnhG family protein from Pseudomonas fluorescens FW300-N2E2

Subject, 306 a.a., L,D-transpeptidase family protein from Rahnella sp. WP5

 Score =  199 bits (506), Expect = 7e-56
 Identities = 117/298 (39%), Positives = 163/298 (54%), Gaps = 10/298 (3%)

Query: 12  LSLAALCMAGHVAALELPLPPPGEDIVGQVQVIKAKYEDTFA--DLGTTYDLGYSEMVAA 69
           L++AA   A    A+  PLP     +VG+   +      +         Y +G S M+ A
Sbjct: 13  LAVAAYSQASF--AVVYPLPANNGRLVGENITVTVPQGSSLPLEHFAAQYQMGLSNMLEA 70

Query: 70  NPGVDPWLPGAGTEIVLPTRFILPPGPREGIVINLAEYRLYYFPKGRNVVYTFPLGIGRE 129
           NPGVDP+LP  GT + +P + ILP  P EGIVIN AE RLYY+PKG N V   P+GIG  
Sbjct: 71  NPGVDPYLPTPGTVLTIPQQLILPETPHEGIVINSAEMRLYYYPKGTNTVVVLPIGIGEL 130

Query: 130 GWGSPIAH-TSIIAKTPNPTWTPPASIKAEHAADGDPLPNVVPAGPDNPLGPFKFTLGTP 188
           G  +P+   T++  K   PTWTP A +  E+A+ G+ LP V PAGPDNP+G +   +G  
Sbjct: 131 GKDTPMNWVTTVQRKKAGPTWTPTAKMHEEYASRGEFLPAVFPAGPDNPMGLYALYVGRL 190

Query: 189 GYLIHGSNKKFGIGMRTSHGCFRMFNNNVLEMAGMVPVGTSVRIINDPYKLGLS-GGKVY 247
            Y +HG+N  FGIG+R SHGC R+ + ++  +   VP GT V+ IN+P K  +   GK Y
Sbjct: 191 -YAVHGTNANFGIGLRVSHGCVRLRDADIKWLFDNVPQGTRVQFINEPVKATVEPDGKRY 249

Query: 248 LEAHTPLDDKGNPSVVDKHTSV-INAMLKREDITSNLRMNWDVVRDVVAAEDGMPVEI 304
           +E H PL    N    D    + I        ++ +  +N  VV+  +    GMPV+I
Sbjct: 250 IEIHNPL--SSNQEEFDSQQPLPITLAGSASSVSMDPAVNQTVVQRAIEMRSGMPVQI 305